Aphidius gifuensis: 122855288
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Entry
122855288 CDS
T07796
Name
(RefSeq) protein CASC3-like isoform X1
KO
K14323
protein CASC3
Organism
agif
Aphidius gifuensis
Pathway
agif03013
Nucleocytoplasmic transport
agif03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122855288
03015 mRNA surveillance pathway
122855288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agif03019
]
122855288
Messenger RNA biogenesis [BR:
agif03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122855288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
122855288
NCBI-ProteinID:
XP_044012471
LinkDB
All DBs
Position
LG4:16453390..16457885
Genome browser
AA seq
989 aa
AA seq
DB search
MSDTRRRRQSEQSAGSDDLSGSIDELNASKEIKSTEPVVEEEEEDDDQEDKEEEQEQNES
EYDTASGSDDESDAESKDGVKRESGDGQEEDKPSKKLDNDKVKVDPQYIPKRGSFYEHDY
RGDDEEEGECIKVIVEEEPEEERDADGKKIWKEKDDKWSHDRFDQNEQAPKSHDELIAVY
GYDIRNEEGPPRARRRRRYGRGPSKYTRHWEDIEAYGKPMYNYTSQKTRRSNKTGEEFPA
LKGTSTTNDKVDKQTDEPVISSAWYSNKNKHQNKQQQPQQQQQMFPPLQPQQQHEQKSKL
SDTNNLQTNENKAPNEPTNPAWKKDAKYTNEQLSPVRNNHNNDGGDKLNQQYIKHNNNNI
NNINNHGNKRNQTQESVSLSANRSRGRGFKPNPNNNLIGNRMETTTKPKGRGNGLITQTN
DNNRRSNVNQHHHDEQIVNDVKHMNINDGVYHNLHNNARQNKNFYVQSNNQQRPTAPTMQ
PRMQQLSSQQQQQQQQQQQPAHQHSSSHQQQQQQPPQQQQQQQQPQQTQTQPQQPLPDVV
ANRPKRYSSLRQRPTIPDGPGQQAYPQSHNQHAQLPQPHTQHGFYPPQAGNSHGVIKSQG
FPQGHFEQATPVPTTAPPMAGQAVMPLAPTGQPSGYAPPAFLVPQPQFIPPQTAPPSLIN
YVPAPNGPAFPQNAYPGYQGYNPSVQPQGPPPPPELFQPQGCTYYSPAQQSHLHHHHHHH
QQQQPAPVRRPKAAIPILPPPDNSQNYQTSRGRGRPVTNNPNNYQNNPANSIQKFDNDND
DKIINEITDNTDFDLTKNKNEQEVATKIEEINSIKENIDEKINIVEEKDNKIVIENDIVE
EKNLTIDNKDEEKEIISIDKENNDEEEEIISIDKEKDINEEKKITVDELKPELITEIKNN
VDEEIVADENKIKSDDILDNKIIEVKKTVDAVDNASLNDDNNDAENEINKSTINIVDKLN
NDVSNNNDIEFKKIDEVVNDNHVLEKAAA
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatacacgtcgtcgtcgtcaatctgaacaatcggctggttctgatgacctttct
ggttcaattgatgaactaaatgcatccaaggaaattaagagtactgaaccagtagtagaa
gaagaagaagaagacgatgatcaagaagacaaggaagaagaacaagaacaaaatgagtca
gagtatgatacagctagtggtagtgatgatgaatcagatgctgaatcaaaagatggtgta
aaacgtgagagtggtgatggtcaagaagaggataaaccatctaaaaaacttgataatgat
aaagttaaagttgatcctcagtatataccaaaacgtggttcattttatgagcatgattat
agaggagatgacgaagaagaaggagaatgcattaaagttattgttgaggaagaaccagaa
gaagaaagagacgcagatggaaaaaaaatatggaaagaaaaagatgataaatggagtcat
gatagatttgatcaaaatgaacaagcaccaaaaagtcatgatgaacttattgctgtttat
ggatatgatattagaaacgaggaaggtccaccaagagctagaagacgtcgtcgttatgga
cgtggaccaagtaaatatactcgtcattgggaagatatagaggcatatggtaaaccaatg
tacaattatacatcacaaaaaacaagacgttcaaataaaactggtgaagaatttccagca
ttaaaaggtacatcaacaacaaatgataaagttgataaacaaacagatgaaccagttata
tcatcagcatggtatagtaataaaaataaacatcaaaataaacaacaacaaccacaacaa
caacaacaaatgtttccaccattacaaccacaacaacaacatgaacaaaaatcaaaatta
tcagatacaaataatttacaaacaaatgaaaataaagcaccaaatgaaccaacaaatcca
gcatggaaaaaagatgcaaaatatacaaatgaacaattaagtccagtaagaaataatcat
aataatgatggtggtgataaattaaatcaacaatatataaaacacaataataataatatt
aataatattaataatcatggtaataaacgtaatcaaacacaagagagtgttagtctatca
gcaaatagatcaagaggacgtggtttcaaaccaaatccaaataataatttaattggtaat
agaatggaaacaacaacaaaaccaaaaggacgtggtaatggtttaataacacaaacaaat
gataataatagacgtagtaatgtcaatcaacatcatcatgatgaacaaattgttaatgat
gttaaacacatgaatattaatgatggtgtttatcataatcttcataataatgcaagacaa
aataaaaacttttatgttcaatctaataatcaacaaagaccaactgcaccaacaatgcaa
cctagaatgcaacagttatcatcacagcaacaacaacagcaacaacaacaacaacaacca
gctcatcaacattcttcttctcatcaacaacaacaacaacagccaccacaacagcagcag
caacaacaacagccacaacaaacacaaacacagccacaacagccattgcctgatgttgtt
gctaatcgtccaaaacgttattcaagtcttcgtcaacgtccaacaataccagatggtcct
ggacaacaagcttatccacaatcacataatcaacacgctcaacttcctcaaccacatact
cagcatggtttttatcctcctcaagctggaaattcacatggtgttataaaatcacaaggt
tttccacaaggacattttgaacaagcaacaccagtaccaacaacagcaccaccaatggct
ggacaagctgttatgccattagctccaactggtcaaccatctggctatgcaccaccagca
tttttagttccacaaccacaatttataccaccacaaacagcaccaccaagtcttataaat
tatgtaccagcaccaaatggtccagcatttccacaaaatgcttatcctggatatcagggt
tataatccaagtgtacaaccacaaggtccaccaccaccaccagaattatttcaaccacag
ggttgtacttattatagtccagctcaacaatcacatcttcatcatcaccatcatcatcat
caacaacaacaaccagcaccagtcagacgaccaaaagcagctattccaattttaccacca
cctgataattcacaaaattatcaaacaagcagaggacgtggtcgtccagttacaaataat
ccaaataattatcaaaataatccagctaattcaatacaaaaattcgataatgataatgat
gataaaataattaatgaaatcactgataatactgattttgatttgacaaaaaataaaaat
gaacaagaagttgcaacgaaaattgaagagattaattcaattaaagaaaatattgatgaa
aaaataaatattgttgaagaaaaagataataaaattgtcatagaaaatgatatagttgaa
gaaaaaaatttaacaattgataataaagatgaagaaaaagaaataatatcaattgataaa
gaaaataatgatgaagaagaagaaataatatcaattgataaagaaaaagatattaatgaa
gaaaaaaaaataactgttgatgaattaaaacctgaattaataacagaaataaaaaataat
gttgatgaagaaattgtagctgatgaaaataaaattaaatctgatgatattttagataat
aaaataattgaagttaaaaaaacagttgatgctgttgataatgcatcattaaatgatgat
aataatgatgctgaaaatgaaataaataaatcaacaataaatattgttgataaattgaat
aacgatgtttcgaataacaatgatattgaatttaaaaaaattgatgaagttgttaatgat
aatcatgttttggaaaaagcagcagcttaa
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