Aphidius gifuensis: 122855344
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Entry
122855344 CDS
T07796
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
agif
Aphidius gifuensis
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
agif01009
]
122855344
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agif03019
]
122855344
04131 Membrane trafficking [BR:
agif04131
]
122855344
03036 Chromosome and associated proteins [BR:
agif03036
]
122855344
Enzymes [BR:
agif01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
122855344
Protein phosphatases and associated proteins [BR:
agif01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122855344
Messenger RNA biogenesis [BR:
agif03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
122855344
Membrane trafficking [BR:
agif04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
122855344
Chromosome and associated proteins [BR:
agif03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
122855344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
DUF3833
Motif
Other DBs
NCBI-GeneID:
122855344
NCBI-ProteinID:
XP_044012575
LinkDB
All DBs
Position
LG1:complement(24444000..24448482)
Genome browser
AA seq
1130 aa
AA seq
DB search
MSSTNTKINLLNAVKQLADSEINLINVIDKSRPDINLKMSTKSTSSTAAINDQRKSSRLA
NIKPSKAIVTAKREATACKKNHLKIKKASDTFYVKDIYEGAIKAKNMIRGMTGIVYDRSM
ADHRCLWDDNYPECPERFIKTLERCEELGLIDRCKIIEPRLASDDELLMKHTQEQIDILK
ATDGSEDLEKLEKLSSKYDAIYIHPSTYRLSLLSTGSTINLFESICRGDVQNGMAIIRPP
GHHAMKAEYCGYCFFNNVAIASEKILADGLAKKILIIDWDVHHGQATQQMFYNDPRVVYF
SIHRYENGEFWPNLKESNYHYVGEDEGIGYNFNVPLNKTGMKNADYLAIFQQVLLPMAYE
FQPDLVVISAGYDAALGCPEGEMEITPAFYSHLLSPLLGLARGKVAVILEGGYCLESLSE
SAALTLRTLLGDPCPMIETLDVPCASIRETILNVIYTHKPYWNCYQYQETYSINSQPSNN
DDTERHLPVVIYNGDETKPEFYLTRDCYPIQSEIFLRNVHDRLNNLKKFTNLNKAPNRVA
LIYDTEMLKHFNYTDNDHPESPERISGIFTKHEEFELIKRCHIMQGRIATEEELLLVHTK
EHIKMVMDTSKLKPSTLAKQSRDYDSVFLNKDTWTSACTAAGSVLSIVDSVLNCESQSGV
AIVRPPGHHAAEDLPSGFCLFNNVAIAAKYAIKHHSLSRVLIVDWDIHHGNGTQSLLEDD
PNILYISLHRYDNANFYPKSKDANYDVVGNNKGEGFNVNIPWNRRKMGDAEYVAAFQQII
MPIAYQFNPELVLISAGFDACIGDSLGGYAVTPEAFGLFTHWLMSLANGRVILALEGGYN
VNSIAYAMTMCTKALLNDPLPPLLFNNNGPCSSAVTTIKNVINTQKKYWPNLVFQAALPK
EKVIPDPEYNQTEYKSESKIAIEQLQSEKLKETSDLTLKLAELAXSTVNLVQQKNNNIYI
KMNSQGAGGSRDDDNKNAGSSTSDGSSTKKLSEFIAECQSDLADGSMFAIYPLNDCPHLD
MINDVPVEGINVKDPCQECSNTSENWICLICFTVHCARNINQHASIHAEDKAHPLTLSFT
DLSVWCYGCDAYIDNPKLYNAKNSAYKNKFNSELPWTYGEQLISLEKNSS
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtacaaatacaaaaatcaatttattaaatgcagttaaacaattggctgatagt
gaaataaatctgattaatgtcattgataaatccaggccagatataaatttaaaaatgtca
acaaaatcaacatcatcaacagcagcaatcaatgatcaacgtaaatcatcaagactggca
aatattaaaccatcaaaagcaattgtaacagcaaaacgtgaagcaacagcttgtaaaaaa
aatcaccttaaaataaaaaaagctagtgatacattttatgtaaaagatatttatgaaggt
gcaataaaagctaaaaatatgattcgtggtatgactggtattgtttatgatcgatcaatg
gctgatcatcgttgtttatgggatgataattatccagagtgtccagaaagatttatcaag
acacttgaaagatgtgaagagcttggattaattgatagatgtaaaattattgagccaaga
cttgcttctgatgatgaattattgatgaaacatacacaagaacaaattgatatactaaaa
gcaactgatggatctgaggatcttgaaaagctcgaaaaattatcatcaaaatatgatgca
atttatatacatccttcaacttatcgattatctcttctttcaactggctcaacgataaat
ctttttgagagtatatgtcgtggtgatgtacaaaatggaatggcaatcataagaccacct
ggacatcatgctatgaaagctgaatattgtggttattgttttttcaataatgtagcaatt
gcatcagaaaaaatattagctgatggacttgctaaaaaaattttaattattgattgggat
gttcatcatggtcaagcaactcaacaaatgttttacaatgatccaagagttgtttatttt
tctattcatcgatatgagaatggtgagttctggccaaatctcaaagaatcaaattatcat
tacgttggtgaggatgaaggtattggctataattttaatgtaccactcaataaaacagga
atgaaaaatgctgattatttagcaatatttcaacaagtacttttaccaatggcatacgag
tttcaaccggatctcgtagtcatttcagctggctacgatgctgcactcggttgtccagag
ggagaaatggaaataacacctgcattttattcacacttgttgtcacctttacttggttta
gctcgtggaaaagtagctgtgattcttgagggtggatattgtttagaatcattgtcagaa
tcagcagcattaacacttcgaactcttcttggtgatccttgtccaatgattgaaactcta
gatgtaccatgtgcaagtattcgtgagacaattttgaatgtcatatacactcacaaacca
tactggaattgttatcagtatcaagaaacttactcaataaattctcagccatcaaataat
gatgatacagaacgacatcttccagttgtcatttacaatggtgatgaaacgaaaccagaa
ttttatttaactcgtgactgttatccaatacaaagtgaaatatttttacgtaatgttcat
gatagattaaataatctaaaaaaatttacaaatttaaacaaagcaccaaatcgtgttgca
cttatttatgatactgaaatgcttaaacattttaattatactgacaatgatcatccagaa
tcaccagaaagaatatcaggtatatttacaaaacatgaagaatttgaattgataaaaaga
tgccatataatgcaaggaagaattgcaacagaagaagaattacttcttgttcatacaaaa
gaacatattaaaatggttatggatacatcaaaattaaaaccatcaacattagcaaaacaa
tcacgtgattatgattctgtatttcttaataaagatacttggacaagtgcatgcactgct
gctggttcagtactaagtattgttgatagtgtattaaattgtgaaagtcaatcaggtgtt
gcaattgtcagaccaccaggtcatcatgctgctgaagatttaccatcaggtttttgttta
tttaataatgttgctattgctgctaaatatgcaatcaaacatcattcattaagcagagta
ttaattgttgattgggatattcatcatggtaatggaacacaatcattacttgaagatgat
ccaaatattttatatatatcacttcatcgttatgataatgcaaatttttatccaaaatca
aaagatgcaaattatgatgttgttggaaataataaaggtgaaggttttaatgttaatata
ccatggaatagaagaaaaatgggtgatgctgaatatgttgctgcatttcaacaaataatt
atgccaattgcatatcaatttaatccagaattggttttaatatctgctggttttgatgca
tgtattggtgattcattgggtggttatgctgttacaccagaagcatttggactttttaca
cattggctaatgtctcttgctaatggtagagtcatattagctcttgagggtggttataat
gttaattcaattgcttatgcaatgactatgtgtacaaaagctttgctcaatgatccatta
cccccacttttatttaacaataatggaccctgctcaagcgctgtcacaacaataaaaaac
gttataaatacacaaaaaaaatattggccaaatttggtatttcaagctgctttaccaaaa
gaaaaagtaattccagatcctgaatacaatcaaactgaatataagagtgaatcaaaaata
gccattgaacaattacaatcagaaaaattaaaagaaacaagtgatttaaccttaaaatta
gctgaattagctnnatcaacagtgaatcttgttcaacaaaaaaataataatatctatata
aaaatgaattcacaaggtgcaggaggaagtcgtgatgatgataataaaaatgctggaagt
agtacaagtgatggttcatcgactaaaaaactaagtgaatttattgctgaatgtcaaagt
gatttagctgatggaagtatgtttgcaatttatccattaaatgattgtccacatctcgat
atgattaatgatgtaccagttgagggtattaatgttaaggatccatgccaagaatgttca
aatacatctgaaaattggatttgtttaatttgttttactgttcattgtgccagaaatata
aatcaacatgcaagtattcatgctgaagataaagctcatccattgacattaagttttaca
gatttatctgtttggtgttatggatgtgatgcatatattgataatccaaaattatataat
gctaaaaattcagcttataaaaataaatttaattctgaattaccttggacatatggagaa
caattaatttctttggaaaaaaattcttcttaa
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integrated database retrieval system
