Aphidius gifuensis: 122855373
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Entry
122855373 CDS
T07796
Name
(RefSeq) nucleoporin NUP42-like
KO
K14321
nucleoporin-like protein 2
Organism
agif
Aphidius gifuensis
Pathway
agif03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122855373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agif03019
]
122855373
Messenger RNA biogenesis [BR:
agif03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122855373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH_4
zf-CCCH
zf-CCCH_PARP12
zf-CCCH_2
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
122855373
NCBI-ProteinID:
XP_044012609
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All DBs
Position
LG4:complement(17811912..17814171)
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AA seq
562 aa
AA seq
DB search
MVLCQYYLSGNCRFGNACKNEHSSGQGTKTLAIVGEEMLLAERGGQWPLSCFSPTKDHAC
IPDMNDVSPEEVRWEMYQAQKSGTVDQTKLQFQQLCQEMSRKREFLKNPSNELLVMLDKI
HKNNRETGFSNKSFTSATATSPFGATTGSNFGTPASSSTTTASGIFSRGMTTNTPSVFGG
QPSFGGAPVFSTQSPSTNSIFGGAVNSTNSVFGGNQNMPGFTSSNPQSSSSIFGGSTSGV
VSGSTTGTSVFGQPSAFGSTAQTPQQNIFSNTQTTTSPFGGVPSATGTLYGGATTITPTQ
SAGSIFGSSQPALSNSSSIFSQQKPVSSGSAFGGAPVFSNSTTFSSAQQNQGFGAQPAFN
MTNSVFGSSTTTSNTFGGSAGNTNSFAALATTPQQQNLFQNNGQNTTSPFGNAVSSTMTN
SSPFGGSINSTSTFGNNNFGNQSVDVNSGFGTSVFTSVSSNQGYGNAPAYASTPSTPFAS
TTSTSSISNPFAQNAQQMSAVLGVTASGTTFGGMSAGLARDKKIYTDDSELTDDEKQMFM
AEQFILGKIPIKPPSIELSECK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggttttgtgccagtattatttgtctggtaattgtcgatttggcaatgcatgtaaaaat
gaacactcaagtggccaaggaaccaaaacactggcaattgttggagaagaaatgctttta
gctgaacgtggtggacaatggcccttgtcatgttttagtccaacaaaagatcatgcttgt
attccagatatgaatgatgtatcacctgaagaagttagatgggaaatgtatcaggctcaa
aagtctggtactgttgatcaaacaaaacttcaatttcaacaattatgtcaagaaatgagt
agaaaaagagaatttttaaaaaatccatcaaatgaacttcttgtaatgttggataaaata
cacaaaaataatagagaaactggattttcaaataaatcatttacatcagcaacagctact
agtccatttggtgctacaacaggaagtaattttggtacaccagcatcatcatcaacaaca
acagcatcaggaatatttagtcgtggaatgacaactaatacaccatctgtttttggtgga
cagccatcatttggtggagctccagttttttctactcaatcaccatcaacaaattcaata
tttggtggtgcagtaaattcgacaaattcagtatttggtggtaatcaaaatatgccagga
tttacttcatcaaatccacaatcttcttcatcaatatttggtggtagtacaagtggtgtt
gttagtggtagtacaactggtacatctgtatttggacagcccagtgcatttggtagtaca
gcacaaactccacaacaaaatatattttcaaatacacaaacaacaacatcaccatttggt
ggtgtgccatcagcaactggtactttatatggtggtgcaacaacaataacaccaacacaa
tcagctggatcaatatttggctcatcacagccagcattatcaaattcatcatcaatattt
agtcaacaaaagccagtatcatcaggatcggcatttggtggtgcgccagtatttagtaat
tcaactacattttcatcagcacaacaaaatcaaggctttggtgcacagccagcattcaat
atgacaaatagtgtttttggatcaagcacaacaacatcaaatacatttggtggatcagct
ggtaatacaaatagttttgctgcacttgcaacaacaccacaacaacaaaatttatttcaa
aataatggacaaaatacaacatcaccatttggtaatgctgtatcatcaacaatgacaaat
tctagtccatttggtggatcaattaattcaacttctacttttggtaataataattttggc
aatcaaagtgttgatgttaattctggatttggaacaagtgtatttacaagtgtttcatca
aatcaaggctatggaaatgcaccagcttatgctagtacaccaagtacaccatttgcttct
acaacatcaacatcatcaatcagtaatccatttgctcaaaatgctcaacaaatgtcagct
gttcttggtgttactgcttctggcacaacatttggtggaatgtcagctggattagctaga
gataaaaaaatatatactgatgactctgaactcactgatgatgaaaaacaaatgttcatg
gcagaacaatttattcttggaaaaattcccattaaaccaccgtcaattgaactttcagaa
tgtaaataa
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