Aphidius gifuensis: 122855724
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Entry
122855724 CDS
T07796
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
agif
Aphidius gifuensis
Pathway
agif03030
DNA replication
agif03410
Base excision repair
agif03420
Nucleotide excision repair
agif03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122855724
03410 Base excision repair
122855724
03420 Nucleotide excision repair
122855724
03430 Mismatch repair
122855724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agif03032
]
122855724
03400 DNA repair and recombination proteins [BR:
agif03400
]
122855724
DNA replication proteins [BR:
agif03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
122855724
DNA repair and recombination proteins [BR:
agif03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
122855724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
RuvB_N
AAA_14
AAA_19
AAA_30
AAA_7
PTCB-BRCT
AAA_16
AAA_33
AAA_5
AAA_11
Motif
Other DBs
NCBI-GeneID:
122855724
NCBI-ProteinID:
XP_044013222
LinkDB
All DBs
Position
LG4:complement(22518324..22522560)
Genome browser
AA seq
1242 aa
AA seq
DB search
MPRDIRSFFQVKNTPSTSKPPEKKVNNRCISSSSDDDIVIATPQLSKAKKNVKKPTSKLV
LLSDDDDDEDDFEKKPTKPTKKLEKTKNTHFLSDSDSDTPPKKKSAKEKIINKKKSSDKH
PLSDSDGDNSHKKKHSNDKIKNKSAKKSTDDHKTPKKQNDKDKLNEKNKKLGSSDDEKTP
KNKKKPNTKTKSHEKDKKVPSIAEMFSRVPIKRVNQPTIQKKVEEADYHMDDDDFIAVLD
QFDNENIIDKTLKNSSNGETTSKRKNRDSDIEKEAKKIKIQDDEVKPELNNVKKEEKKLS
DDVEMKIESNDDRNKKNKDKKEEKKLIDEDEIKIKSNDEKNKKEEKKLVRDDEMKIKSND
DKKVKEKSSNHVEKIKETLDISKNNEEPSSSTKKNTNDAKKSSKIDKKKTKKHEVEIEEN
KKPDNKKNATEDDFDFLEDRIIKKKQHAASYQSYLSRGGARNPGSKEIPVGAVNCLAGLT
FVVTGVLDSLERFEADELIQKYGGRTVAALSKKTNYLVVGDQAGESKLNKADVLKIKKIS
EDELLDLIRTRKAGKATDIILTKSKKDNHNKSFKEDTKPLDTSLYVPKTLSNEDKTRTGS
SSSSASLTSSVDTPNNKNETKEKEKIINNETPIKLIEKKEPVTKTIKDNKIDNNIKINLP
YVEPTAALVEKYRPKTMKQIIGQQTDKSCAKKFYLWLKNWHKNQNNKSTKLTRPSPFAKS
DDGAYFKACLLSGPPGIGKTTTVQVACKELGFDLLEFNASDTRSKKLLQNQISTILSNKT
AKDYFSIDNNSNNENDGKNMSLKHVLLMDEVDGMAGNEDRGGLQELIALIKSTDIPIVCI
CNDRNNPKMRTLVNYTFDLRFTKPKLEQIRGAMMSLCYAEKIKITKDDIDKIIEMSGYDI
RQVINYLSMRSGDELSNITNENLTNKINKDEKLTPWSVVEKVFSCEAHKNMSIHDKSNLF
FHDYNIGSLFVQENYLTIIPKAPKCETLERIALSADSLSIGDVIEKAIRSRDAWSLLPVQ
ACFSSVIPGTLMSGNTVGRTNFPSWLGKNSTARKFDRLLQEITSHTRLVTGASKDAVIFD
YLKPLRDAVVRPLVVDGSDGVESAVETMIHYHMLKDDLEGLIECSLWPGQRDPMQGIESK
VKAAFTRMYNKKAPIMPYKIGDAPKKKSIQASQESGFGSDGDEIIDDDDDEDEDKDKDDN
LEKDRMIKVKKPTKTTNAGASTSKGQTKTTTRGRGRGRGRGK
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgccacgggatattaggtcattttttcaagttaaaaatactccaagtacaagtaaacca
ccagaaaaaaaagtaaacaacagatgtatatcgtcgtcatcagatgatgacattgtcatt
gcaacacctcaactatcaaaagctaaaaaaaatgttaaaaaaccaacttcaaaacttgtg
ttgctttcagatgatgatgatgatgaagatgattttgaaaaaaagccaacaaaacctact
aaaaaattagaaaaaactaaaaatacacattttttgtcggattctgatagtgatacacct
ccaaaaaaaaaatctgctaaagaaaaaattattaacaagaaaaaatccagtgataaacat
cctttgtcggattctgatggtgataattcacataaaaagaaacattcaaatgataaaatt
aaaaataaatcagctaaaaaatcaacagatgatcataaaacacctaaaaaacaaaatgat
aaagataaattaaatgaaaaaaataaaaaacttggttcatctgatgatgaaaaaacacca
aaaaataaaaaaaaaccaaatacaaaaactaaaagtcatgaaaaagataaaaaagtacca
agtattgcagaaatgttttctcgtgttccaataaaacgtgttaatcaaccaacaattcaa
aaaaaagtagaagaagctgattatcatatggatgatgatgattttatagcagtacttgat
caatttgacaatgaaaatattattgataaaacacttaaaaattcatcaaatggtgagaca
acatctaaaagaaaaaatcgtgatagtgatattgaaaaagaagctaaaaaaattaaaatt
caggatgatgaagtgaaacctgaattaaataatgttaaaaaagaagagaaaaaattaagt
gatgatgttgaaatgaaaattgaatcaaatgatgatagaaataaaaaaaataaagataaa
aaagaagaaaaaaaattaattgatgaagatgaaataaaaattaaatcaaatgatgaaaaa
aataaaaaagaagagaaaaaattggttcgtgatgatgaaatgaaaatcaaatcaaatgat
gataaaaaggtaaaagaaaaatcaagtaatcatgttgaaaagataaaagaaacattagat
atttctaaaaataatgaagaaccaagttcttcaacaaaaaaaaatactaatgatgctaaa
aaatcatcaaagattgataaaaaaaaaacaaaaaagcatgaagttgaaattgaagaaaat
aaaaaaccagacaataaaaaaaatgcaactgaagatgattttgattttcttgaagataga
attattaaaaaaaaacaacatgcagcatcttatcaaagttacttgtctcgtggtggtgca
agaaatccaggctcaaaagaaattccagttggtgctgtaaattgtcttgctggtttgaca
tttgttgtaactggagttcttgattcacttgaaagatttgaagctgatgaactgatacaa
aaatacggtggtagaacagttgcagcattatcaaaaaaaacaaattatcttgttgttggt
gatcaagctggtgaatcaaaattaaacaaagctgatgtattaaaaattaaaaaaattagt
gaagatgaattattggatttaataagaacaagaaaagctggtaaagctacagatattatt
ttaactaaatctaaaaaagataatcataataaatcattcaaagaagatactaaacctctt
gatactagtttatatgtaccaaaaacattatcaaatgaagataaaacaagaactggaagt
agttcatcatcagcatcattaacatcatcagttgacacgccaaataataaaaatgaaact
aaagaaaaagaaaaaataataaacaatgaaacaccaataaaactgattgaaaaaaaagaa
ccagtaacaaaaacaatcaaagataataaaatagataataatattaaaattaatttacca
tatgttgaaccaacagcagctcttgttgaaaaatatcgtccaaaaacaatgaaacaaata
attggtcaacaaacagataaaagttgtgctaaaaaattttatttatggttaaaaaattgg
cataaaaatcaaaataataaaagcacaaaattaacacgtccatcaccatttgctaaaagt
gatgatggtgcatattttaaagcatgtttattatctggaccacctggtattggtaaaaca
acaacagtacaagttgcatgtaaagaacttggttttgatttacttgaatttaatgcatca
gatacaagaagtaaaaaattattacaaaatcaaatatcaacaattctttcaaataaaaca
gccaaagattatttttcaatagataataattcaaataatgaaaatgatggtaaaaatatg
tcattaaaacatgtattattaatggatgaagttgatggtatggctggtaatgaagatcgt
ggtggtttacaagaattaattgctttaataaaatcaacagatataccaattgtttgtatt
tgtaatgatcgtaataatccaaaaatgcgtacacttgttaattatacatttgatttacgt
tttacaaaaccaaaacttgaacaaatacgtggtgctatgatgtcattatgttatgctgaa
aaaataaaaataacaaaagatgatattgataaaataattgaaatgtcaggatatgatata
cgtcaagttataaattatttatcaatgagaagtggtgatgaattatcaaatataacaaat
gaaaatttaacaaataaaattaataaagatgaaaaattaacaccatggagtgttgttgaa
aaagtatttagttgtgaagcacataaaaatatgtcaatacatgataaaagtaatttattt
tttcatgattataatattggtagtttatttgtacaagaaaattatttaacaataatacca
aaagcaccaaaatgtgaaacattagaaagaattgcattgagtgctgatagtttatcaatt
ggtgatgttattgaaaaagcaatacgttcacgtgatgcatggtcattgttaccagtacaa
gcatgtttttcatctgttatacctggtacattaatgtctggtaatactgttggtcgtact
aattttccaagttggcttggtaaaaattcaacagcacgtaaatttgatagattattacaa
gaaataacatcacatacacgtcttgtaactggtgcaagtaaagacgctgttatatttgat
tatttaaaaccattacgtgatgctgttgttagaccacttgttgttgatggctctgatgga
gttgaaagtgctgttgaaacaatgatacattatcatatgttaaaagatgatttagaaggt
ttaattgaatgttcattatggccaggacaacgtgatccaatgcaaggaattgaatcaaaa
gtcaaagctgcatttacaagaatgtataataaaaaagcaccaataatgccatataaaatt
ggtgatgcaccgaaaaaaaaatctatacaagcatcacaagaatctggttttggtagtgat
ggtgatgaaattattgatgatgatgatgatgaagatgaagataaagataaagatgataac
ttggaaaaagatagaatgattaaagttaaaaaaccaacaaaaacaacaaatgctggagca
tcaactagcaaaggccagactaaaacaacaacaagaggacgtggacgaggacgtggtcgt
ggcaaataa
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