KEGG   Aphidius gifuensis: 122857216
Entry
122857216         CDS       T07796                                 
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
agif  Aphidius gifuensis
Pathway
agif03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:agif00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122857216
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:agif03041]
    122857216
   03036 Chromosome and associated proteins [BR:agif03036]
    122857216
Spliceosome [BR:agif03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    122857216
 Complex B
    122857216
 Complex C
   U2 SnRNP specific factors
    122857216
Chromosome and associated proteins [BR:agif03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    122857216
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG UME CEP104-like_TOG DUF2298
Other DBs
NCBI-GeneID: 122857216
NCBI-ProteinID: XP_044015202
LinkDB
Position
LG5:5492097..5498292
AA seq 1329 aa
MDSIPRTHEDIEAQIKEIQSKKKDIQSSVTEKEQVGLGKTGYYDQDIYDGTNNKFDGYVT
SIAANDEVEDEEFEPVSFGSKRPSFNAPAALLNDVAQTGKEYDPFADRRRPTVGDRVGAN
EYQQKRRTIGVISPDRNDPFADGGKTPEPGARTFNVIMKEQWVRGEEIEVKKQILEKKKD
GTLQTNGDQKPVVKKRGRWDQTEDAPPIKKTAGTTLTTTTTGATTTTTTASWENTDVTPA
AVRWDETPGHGKGGETPGATPGQSTRMWEATPGHATPGAVTPGRETPADKISQSRRNRWD
ETPKTDRETPGHNSGWAETPRTDRISGDLIQETPTPSASKRRSRWDETPSNQTPGSMTPQ
TPATPLTTPHQNNNLMTPSSATPIGNKAMGLATPTPGHMMSMTPEQLQAFRWEKEIDERN
RPLSDDELDSLFPPGYKVLQPPVGYIPIRTPARKLTATPTPMAGTPQGFFIQTEDKSAKY
IDNQPKGNLPFMKPEDAQYFDKLLVDVDEETLTPEEQKERKIMKLLLKIKNGTPPMRKAA
LRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKIL
VVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVV
ASALGIPSLLPFLKAVCRSKKSWQARHTGIKIVQQIAILMGCAILPHLKSLVEIIEHGLV
DEQQKVRTITALAIAALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLAAFLKAIGYLIP
LMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEASYIKDDILVHFF
KHFWNHRMALDRRNYRQLVDTTVEIANKVGASEIINRIVDDLKDENEQYRKMVMETIEKI
MGNLGAADVDSRLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNTLGKRVKAYLPQICGT
ILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILG
ALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREW
MRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVA
IAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVSPLLED
ALMDRDLVHRQTACAAIKHMALGVYGFGCEDALIHLLNHVWPNVFETSPHLVQAFMDAVD
GLRVALGPIKILQYTLQGLFHPARKVRDVYWKIYNSLYIGGQDALVAGYPRIVNDPKNQY
IRYELDYVL
NT seq 3990 nt   +upstreamnt  +downstreamnt
atggactccatcccaagaactcatgaagatattgaagcgcaaattaaagaaattcaatcg
aaaaaaaaagatatacaatcatcagttactgaaaaagaacaagttggtcttggaaaaaca
ggctattatgatcaagatatttatgatggtaccaataataaatttgatggatatgtaaca
tcaattgctgcaaatgatgaagtcgaggatgaagaattcgagccagtttcttttggttca
aagagaccttcatttaatgcaccagctgctttgctcaatgatgttgctcaaactggaaaa
gaatatgatccatttgctgatcgacgtcgtccaactgttggtgatcgtgttggagcaaat
gaatatcaacaaaaacgtcgaacaattggagtcatttcaccagatagaaatgatccattt
gctgatggtggaaaaacaccagaaccaggagcaaggacattcaatgttattatgaaagaa
caatgggttagaggagaagaaatagaggtaaaaaaacaaattcttgaaaagaaaaaagat
ggtacactacaaacaaatggtgatcaaaaaccagttgttaaaaaacgtggaagatgggat
caaactgaggatgctccaccaattaaaaaaacagctggtacaacattaaccacaacaaca
acaggagcaacaacaacaacaacaacagcatcatgggaaaatacagatgttacaccagct
gctgtacgttgggatgaaacaccaggacatggtaaaggtggtgaaacaccaggtgcaaca
cctggacaatcaacacgtatgtgggaagcaacaccaggtcatgcaacacctggtgcagta
acacctggtcgtgaaacaccagcagataaaatatcacaatcacgtagaaatcgttgggat
gaaacaccaaaaacagatcgtgaaacacctggtcataatagtggttgggctgaaacacca
cgtactgatcgtattagtggtgatttaatacaagaaacaccaacaccatcagcatcaaaa
cgtcgttcaagatgggatgaaacaccatcaaatcaaacaccaggttcaatgacaccacaa
acaccagcaacaccattaacaacaccacatcaaaataataatttaatgacaccatcatca
gcaacaccaattggtaataaagctatgggtcttgcaacaccaacaccaggacatatgatg
tcaatgacaccagaacaattacaagcatttcgttgggaaaaagaaattgatgaaagaaat
cgtccattatctgatgatgaacttgattcattatttccaccaggttataaagtattacaa
ccaccagttggttatataccaatacgtacaccagcacgtaaattaacagcaacaccaaca
ccaatggctggtacaccacaaggtttttttatacaaacagaagataaaagtgcaaaatat
attgataatcaaccaaaaggtaatttaccatttatgaaaccagaagatgcacaatatttt
gataaattattagttgatgttgatgaagaaactttaacaccagaagaacaaaaagaaaga
aaaataatgaaattattattaaaaattaaaaatggtacaccaccaatgagaaaagcagca
ttacgtcaaataacagataaagcacgtgaatttggtgctggtccattatttaatcaaata
ttaccactgttaatgtcaccaacacttgaagatcaagaacgtcatttacttgttaaagtt
attgatagaatattatataaacttgatgatcttgtacgtccatatgtacataaaatatta
gttgttattgaaccattattaattgatgaagattattatgcacgtgttgaaggacgtgaa
ataatatcaaatttagcaaaagctgctggacttgcaacaatgatatcaacaatgcgtcct
gatattgataatattgatgaatatgttagaaatacaacagcacgtgcatttgctgttgtt
gctagtgcacttggtataccatcattattaccatttttaaaagctgtatgtagatctaaa
aaatcatggcaagcacgtcatactggtattaaaattgtacaacaaattgcaatattaatg
ggttgtgcaatattaccacatttaaaatcacttgttgaaattattgaacatggtttagtt
gatgaacaacaaaaagtacgtacaataacagctcttgctattgcagcacttgctgaagca
gcaacaccatatggtattgaaagttttgattcagtattaaaaccattatggaaaggtatt
agaacacatcgtggtaaaggtcttgctgcatttttaaaagcaattggttatttaatacca
ttgatggatgctgaatatgcaaattattatacacgtgaagttatgttaatattaatacgt
gaatttcaatcaccagatgaagaaatgaaaaaaattgtattaaaagttgttaaacaatgt
tgtggtactgatggtgttgaagcatcatatattaaagatgatatacttgtacattttttt
aaacatttttggaatcatcgtatggcacttgatcgtagaaattatcgtcaacttgttgat
acaactgttgaaattgcaaataaagttggtgcatctgaaattataaatcgtattgttgat
gatcttaaagatgaaaatgaacaatatagaaaaatggttatggaaacaattgaaaaaata
atgggtaatttaggtgctgctgatgttgattcaagattagaagaacaacttattgatggt
atattatatgcatttcaagaacaaacaactgaagatgttgttatgttgaatggttttggt
acaattgttaatacacttggtaaacgtgttaaagcatatttaccacaaatatgtggtaca
atattatggagattaaataataaatcagcaaaagtacgtcaacaagctgctgatttaata
tcacgtattgctgttgttatgaaaacatgtcaagaagaaaaattaatgggtcatcttggt
gttgtattatatgaatatttaggtgaagaatatccagaagtattgggtagtatacttggt
gcattaaaagcaattgtaaatgttattggtatgactaaaatgacaccaccaattaaagat
ttattaccacgtttaacaccaatattaaaaaatcgtcatgaaaaagtacaagaaaattgt
attgatcttgttggtagaattgctgatcgtggaccagaatatgtatcagcacgtgaatgg
atgagaatatgttttgaattattagaattattaaaagcccataaaaaagctataagacgt
gcaactgttaatacatttggttatattgctaaagcaattggtccacatgatgtattagca
acattattaaataatttaaaagtacaagaacgtcaaaatcgtgtatgtacaactgttgct
attgcaattgttgctgaaacatgttcaccatttactgtattaccagcattaatgaatgaa
tatcgtgtaccagaattaaatgtacaaaatggtgtacttaaatcattgagttttttgttt
gaatatattggtgaaatgggaaaagattatatatatgctgtaagtccattgttggaagat
gcattaatggatcgtgatttggtacatcgtcaaacagcatgtgctgctattaaacatatg
gcacttggtgtttatggttttggttgtgaagatgcattaatacatttacttaatcatgta
tggccaaatgtatttgaaacatcaccacatttagtacaagcatttatggatgctgttgat
ggtttacgtgttgcattgggtccaattaaaatattacaatatacattacaaggcttattt
catccagcaagaaaagtcagagatgtctattggaaaatatataattcattgtatattggt
ggacaagatgcacttgttgctggttatccaagaatagttaatgatccaaaaaatcaatat
ataagatatgagcttgattatgttctttaa

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