KEGG   Aphidius gifuensis: 122857488
Entry
122857488         CDS       T07796                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
agif  Aphidius gifuensis
Pathway
agif03030  DNA replication
agif03410  Base excision repair
agif03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:agif00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    122857488
   03410 Base excision repair
    122857488
   03420 Nucleotide excision repair
    122857488
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:agif03032]
    122857488
   03400 DNA repair and recombination proteins [BR:agif03400]
    122857488
Enzymes [BR:agif01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     122857488
DNA replication proteins [BR:agif03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    122857488
DNA repair and recombination proteins [BR:agif03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      122857488
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2 APP_N Toxin_28
Other DBs
NCBI-GeneID: 122857488
NCBI-ProteinID: XP_044015608
LinkDB
Position
LG5:8682654..8689765
AA seq 2239 aa
MFPLRNSGKLVKQPEAKRNNYKNVSRENTAEMRLEQAKDNIRVDSLYGFERLTDVRERVG
YLINMHASEIAEEDKRIISGIDYYFLEEDCTRFKVTMPYYPYFYIKCTQNCEAEVSTYLS
KKYTSTLVKVECVKKEDLDLPNHLIGLQQKYLKLSFANQADMQKVRMDIKRAVKLNQERA
KSRTHYSELLTSTFQTNKEEASMKTNVDHMENIIDIREFDVQHHVRASIDLNIFVGTWYS
VKYRGTEPPSIVRREDLIEPVEPIVLAYDIETTKLPLKFPDANSDQIMMISYMIDGQGFL
ITNREIISQDIESFEYTPKPEMEGLFTVFNEADEKATIRKFFDHILDVRPHIFVTYNGDF
FDWPFVETRAAIHGMNMKELIGWSKSREDVYVSRPAIHMDALSWVRRDSYLPVGSQGLKA
VTKAKLRYNPVEVEPEEMCRLAAEDPVTLANYSVSDAVATYYLYQKYVHPFIFALCTIIP
MEPDEVLRKGSGTLCETLLMVEAFRANIIFPNKQEAELNKLTSDGHLLDAETYVGGHVEA
LESGVFRADIPYRFKLDTTALDELIESVPKTLRHTIQEEEKLDLNLVTNFDEIVDAIKQK
LGELKAEPLRLEQPRIYHLDVGAMYPNIILTNRLQPSAMVDETVCAACDFNTSNAKCKRT
MSWQWRGDYLSASLGEYQRVQQQLETEKFPPQFPGGPRRAFHTLSKQEQADFQKKRLTDY
CKKAYKKTKVQRIEERQQTICQKENSFYVDTVRAFRDRRYEYKGLTKVAKQQVAAATAKN
DASEIKSAKNREVLYDSLQLAHKCILNSFYGYVMRRGSRWFSMEMGGIVCLTGAHIIMKA
REIVEKIGRPLELDTDGIWCILPASFPDNYVITTNHKKKTKVTISYPNAVLNFMVKDQFT
NSQYHELVDPIEGTYEIRQENSIFFEVDGPYLGMVLPSSKEEGKRLKKRYAVFNFDGTLA
ELKGFEVKRRGELQLIKIFQSSVFDSFLKGKTLEECYQSVAKVADYWLDVLYSKGTDIPD
AELFELISENKSMSKKLEDYGSQKSTSISTAKRLAEFLGGQMLKDAGLACKFIISKKPYG
APVAERAIPLAIFQSDNNVKGHYLRKWLKEPGLENFDIREVLDWNYYIERLSSTIQKIIT
IPAAMQGVANPVPRVKHPDWLHKRLLEKNNTNKQRKITDLFSFEPRQVEETNENDQHQDI
QDIEDSAGGSSTVNRPIPVVTKRKRVSQEEDSDLSKSWKEVLGSPPSQGSTRAEQTAWLE
FHKKKWAFQAQQRSQRLRKRAKMVQNDMEIPRGLIRHSEPSTITGFFRRNQRKLLESPWQ
IIQISETSEPGMFRLWVLIDNELNQIRLIVPRIFYLNTKKERDAPKANELWSKCSKILPR
SRTVYHLYQYTVPEELYLKHSENLMEDVTNPENEGIYETQMPLMFRAILNLGCVCTVDPR
TAKTMADGSDTFHLHQLVIKETNSIYLRDRNSFKYIYLYHHWSANKQRSMFGLFLGPSKR
AHIYVVDSVRTNQMPNMSTLYNTEKSLIRNENPDIDIIDELHFEVRVETSQQSVNKHLQT
ALKSYKNEMKGATFVLLQSSMEMTNLLTEIPGLADYPVINTNIQEPDKLFSTLEWQKTGA
KSMIKHFLKINDILNLKIEQSKFFSSPIGNIPADSTLFSADLFYARNLQSHNFVTWCSQT
ERPDLGGSEDDDNRLLTEFEEASGCVTNKSGAYSNVCIELEIESLAITALLQSQKVNNID
GTSNFVAYHNQPQASLQDIATGEGNIALPSYDETALCSKAFGVLKQTVSQWLQAVVKYKN
VFADEQLIHFYRWLRSPNSLLYDPALRRTLHSYMKKLFVQLIAEFKRLGSIIVFSDFNRI
LICTKKRKINEALEYTKFVLKTICDKELLHGIGISLLKSWEFLLWLDQSNFAGVIGQVEQ
MSQETSDQDQDEDDEVPVTMNWNLAEILSKNPSCYNHFEKVIGGYIEAIKEVMNDIDPVF
GTPKPKRRRQSFLSQKIGSQNGLGSLENTAEYVKNLISGELTLKLLKIVERIHKKNPETL
LTIEECPNLNFSGADSMKIVPALEFIKSICKVFSLDKEVENEVYELKKNLLRIINIGCFS
STCEWKDPCISFIIPEVICKACNHTRDVDLCKDINQTIIGGIHIWFCPGCETSYDNNEIE
MLLIDMLNRKSMAYLLQDLRCKKCGEVKRENIMSNCTCAGEFKLTMSKDDMLKTIKILRA
ISKKCQMNRLADLIKCTML
NT seq 6720 nt   +upstreamnt  +downstreamnt
atgtttcctttgagaaattctggcaagctagtgaagcaacccgaagcaaaaagaaataat
tacaaaaatgtatcaagggaaaacacagcagaaatgcgccttgaacaggcaaaagataat
atcagagttgacagtttatacggttttgagcgtctcaccgatgtcagagaacgtgtcggt
tacctcatcaacatgcacgcttctgaaatagccgaggaagacaaaaggatcataagtggt
attgattattacttccttgaagaagactgcacgagatttaaagtaaccatgccatactac
ccctacttttacataaaatgtacacaaaactgtgaagccgaggtatcaacatatttatca
aaaaaatataccagtacacttgttaaagttgagtgtgttaaaaaagaagatctagacttg
ccaaatcatttgattggactccaacaaaaatacttgaaattgtcgtttgccaatcaagct
gacatgcaaaaggtacgaatggatataaaaagagctgtcaagttaaatcaagaacgtgca
aaaagtcgcacacattactcggaattattaacaagtacatttcagacaaataaagaagaa
gcttcaatgaaaaccaacgttgatcacatggaaaatattatagacattagagaatttgat
gtccaacatcatgtcagagcctcgattgatcttaatatatttgttggcacctggtactct
gtcaagtatcgtggtactgagccaccaagtatcgttcgtcgtgaagatcttattgaacca
gttgagccaattgttttggcttatgatattgaaacgacaaaattaccccttaaatttccg
gatgctaattccgatcaaattatgatgatatcttatatgattgatggtcagggttttctc
ataacaaatcgtgaaataatttcccaagacatagaaagttttgagtatacacccaaacca
gaaatggaaggattattcacagtattcaatgaggctgatgaaaaagcaacaattcgtaaa
ttttttgatcacattttagatgttcgtcctcatatttttgtcacatacaatggagatttt
tttgattggccatttgttgaaacaagagctgctattcatggaatgaacatgaaagaatta
attggttggtcaaagagtcgcgaagatgtatatgttagtcgccccgcaattcatatggat
gccttgagctgggtcagaagagattcgtatcttcccgttggatctcaaggtcttaaagct
gtaactaaagccaaacttcgatataatccagttgaggtagagcctgaagaaatgtgtcga
cttgctgctgaagatccagttactctggcaaattattcagtttccgacgcagttgcaact
tactatttatatcaaaaatacgttcatccatttatatttgcactttgtacaattattcca
atggaacccgatgaagttttgagaaaaggttctggaacactatgtgaaactttattaatg
gttgaagcattccgggcaaatattatatttccaaataagcaagaagctgaattaaataaa
ttaacaagtgatggacatttacttgatgctgaaacttacgttggtggtcatgttgaggca
ctggaatctggtgtttttcgtgctgacataccgtatcgttttaagcttgatacaacggca
cttgatgaactcattgagagtgtacctaaaactttaagacacacgatacaagaagaagaa
aaattagatctcaatttggtgacaaattttgatgaaattgttgatgcaattaaacaaaaa
ttgggtgagttaaaggctgaaccattacgactagaacaaccgagaatttatcatcttgat
gttggtgctatgtatcctaatatcattttaacaaaccgacttcagccgtcggcgatggtt
gacgagacagtttgtgctgcatgtgacttcaacacaagtaatgcaaaatgcaagagaacc
atgtcctggcaatggcgtggtgattatttatcagcaagtcttggtgaatatcagagagtt
caacagcagcttgaaactgaaaaatttcctcctcaatttcccggtggaccacgacgtgca
tttcacacactctcaaaacaggaacaggcagattttcaaaaaaaacgcctcacagattat
tgcaaaaaagcttataaaaaaacaaaagtccagagaattgaggaacgtcaacaaacaata
tgtcaaaaagaaaattcattttatgttgatacggtcagggcattcagggatcgtcgatat
gagtacaaaggattaaccaaagttgccaagcaacaggttgctgctgcaacagcaaaaaac
gatgcaagtgaaataaaatcagctaaaaatcgtgaagttttatatgattcacttcagctt
gctcacaagtgtattttaaattcattttatggctacgtaatgagacgaggatcacgttgg
ttcagtatggaaatgggtggaattgtttgtcttactggagcccatattatcatgaaagct
cgtgaaattgttgaaaaaattggtcgaccacttgaacttgatacagatggaatttggtgt
attttacctgcatcatttcctgataattatgtcattactacaaatcataaaaaaaaaaca
aaagtaacaatatcatatccaaatgcggttttaaattttatggttaaagatcaatttaca
aattcacaatatcatgaactagttgatcccattgaaggaacatatgaaatacgacaggaa
aattcaattttttttgaagttgatggaccatatcttggtatggtattgccatcatctaaa
gaggaaggtaaaagattgaaaaaacgctatgctgtttttaattttgatggaactcttgct
gagctgaaaggatttgaagtaaaacgacgtggtgaattgcagttaattaaaatttttcaa
tcttctgtatttgattcatttttaaaaggtaaaacacttgaagagtgttatcagtctgtt
gccaaagttgctgattactggctggatgtattatacagcaagggtactgatataccagat
gctgaactttttgagcttatctcagaaaacaaatcaatgtcaaaaaaattggaagactat
ggatctcaaaaatcaacgtcaatatcaacagccaagagactcgctgaatttcttggtgga
caaatgcttaaagatgctggtttggcatgtaaatttatcatatcgaaaaaaccatatggt
gcacctgttgctgagcgtgcaattcctcttgcaatattccaatctgacaacaatgtcaaa
gggcattatctacgaaaatggcttaaagaacctggtttagaaaattttgatataagagaa
gtacttgattggaattattatatcgagcgacttagtagtacaattcaaaaaatcattaca
ataccagcagcaatgcagggtgttgcaaatccagttccaagagtcaagcatccagactgg
ttgcacaagcgccttttagaaaaaaataatactaataagcagcgtaaaataacagattta
tttagctttgaaccaagacaagttgaagaaactaatgaaaatgatcaacaccaagatatt
caagacattgaagactctgctggtggctcatcaactgtaaatcgaccaattccagttgtg
acaaaacgtaaacgtgtatctcaagaggaggatagtgatttgagcaaaagttggaaagaa
gtattgggctctccaccatcacaggggtctacacgagcagagcaaacagcttggttagaa
tttcacaaaaaaaaatgggcatttcaggctcaacaaagaagtcaaagactccgtaagcga
gctaaaatggtacaaaatgacatggaaattcctaggggtcttattagacactctgaacca
tcaactattactggattttttcgacgaaatcaaagaaaattattggaatcaccatggcaa
ataatacaaatatccgaaacatctgaaccaggtatgtttcgtctctgggtacttattgat
aatgaattaaatcaaattcgtttaattgttccgaggatattttatttaaatacaaaaaaa
gaaagagatgccccaaaagccaatgaactctggtctaagtgttcaaaaattttgccaagg
tctcgaactgtttatcatctttatcagtacactgtcccagaggaactttatttaaaacac
agtgaaaatttaatggaagatgttaccaacccagagaacgagggaatttatgaaacacaa
atgcctcttatgtttcgagcaattttaaatcttggttgtgtttgtactgttgatcctcga
acagcaaaaacaatggctgatggttcagatacatttcatttacatcaacttgttatcaaa
gagacaaatagtatctatctcagagatagaaattcatttaaatatatttatttgtatcat
cattggtcagctaacaagcaaagaagtatgtttggattatttttgggtccaagcaaaaga
gctcatatttatgtggtcgattctgttagaacaaatcaaatgccaaatatgtcaacactg
tataatacagaaaaatcattaattagaaatgaaaatccagatattgatattattgatgaa
ttgcattttgaagttcgagttgaaacaagtcaacaatcggttaacaaacatctacaaaca
gcattgaagtcttataaaaatgaaatgaaaggtgcaacttttgtcttgcttcaatcatca
atggaaatgacaaatttattgactgaaatacctggtcttgctgactatcctgtgataaat
acaaacatacaagagccagataaattatttagtacactggaatggcaaaaaactggagca
aaatcaatgattaaacattttttaaaaattaatgatatattaaatttaaaaattgaacaa
tcaaaatttttttcatcaccaattggcaatataccagctgattcaacattattttcagct
gatcttttttatgcaagaaatttacaaagtcataattttgttacttggtgttcacaaact
gagagaccagatcttggtggcagtgaagatgacgataacagattactaacagaatttgaa
gaagcatctggatgtgtcaccaataaatccggtgcctattcgaatgtttgcattgagttg
gaaattgaaagtttagcaataacagctcttttacaatcgcaaaaagttaataatattgat
ggaactagtaattttgttgcttatcataatcaaccacaggctagtctccaagacattgca
actggtgaaggtaatattgctttgccatcttatgatgaaacggctttatgctccaaggca
tttggcgtattgaaacaaacagttagccaatggctccaagccgttgttaagtacaaaaat
gtatttgctgatgaacaacttattcatttttatcgatggctcagatcaccaaattcattg
ctctatgatcctgcacttcgtcgtactcttcatagttacatgaaaaaattatttgtccaa
ttaattgctgaattcaaaagacttggatctatcattgtattttctgattttaatagaata
cttatttgtacaaaaaaaagaaaaataaatgaagcacttgaatatacgaaatttgtgtta
aagacaatatgtgataaagaacttttacatggtattggaatatcattgttaaaatcatgg
gaatttttattgtggttggatcagtcaaattttgctggtgttataggtcaagttgagcaa
atgagccaagaaacaagtgatcaagatcaagatgaagatgatgaagtaccagttacaatg
aattggaatttagctgaaatattatcaaaaaatccatcgtgttataatcattttgaaaaa
gttattggtggttatatcgaggcaattaaagaagttatgaatgacattgatccagtcttt
ggtacacctaaaccaaaaagacgaagacagagttttttatcacaaaaaattggatctcaa
aatggtcttggatcacttgaaaacactgctgagtatgttaaaaatttaatatctggtgaa
cttaccctaaaattattaaaaattgtcgaaagaattcacaaaaaaaatccagaaactttg
ttgacaattgaagaatgtccaaacttaaatttttctggtgcggacagcatgaaaattgta
ccagcattagagtttatcaagtcaatatgtaaagtattttccttggacaaagaagttgaa
aacgaggtttatgagttaaaaaaaaatcttctgagaatcataaatattggttgttttagt
tcaacatgtgaatggaaagatccatgtatatcttttattattcctgaagttatctgtaaa
gcatgtaatcatacacgtgatgttgatctttgcaaagatattaatcaaacgatcattgga
ggaattcacatttggttttgtcctggttgtgaaacaagttacgataataatgaaattgaa
atgttactaattgacatgttaaacagaaaaagcatggcttatttattacaagatttaaga
tgtaaaaaatgtggtgaagttaaacgagaaaatataatgagtaattgtacttgtgctggt
gaatttaaacttacaatgtctaaagatgacatgttaaaaactatcaaaatattgagagcg
atatcaaaaaaatgccagatgaatcgtcttgctgatcttattaaatgtaccatgctatga

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