Aphidius gifuensis: 122857502
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Entry
122857502 CDS
T07796
Name
(RefSeq) chromatin assembly factor 1 p55 subunit
KO
K10752
histone-binding protein RBBP4
Organism
agif
Aphidius gifuensis
Pathway
agif03082
ATP-dependent chromatin remodeling
agif03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122857502
03083 Polycomb repressive complex
122857502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
agif03036
]
122857502
Chromosome and associated proteins [BR:
agif03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
122857502
Histone modification proteins
HAT complexes
HATB complex
122857502
HDAC complexes
Sin3A-HDAC complex
122857502
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
122857502
PRC2.2
122857502
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
122857502
Heterochromatin formation proteins
Other heterochromatin formation proteins
122857502
Chromatin remodeling factors
NuRD complex
122857502
NuRF complex
122857502
NuRF complex (fruit fly)
122857502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_WDR19_1st
ANAPC4_WD40
eIF2A
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
122857502
NCBI-ProteinID:
XP_044015643
LinkDB
All DBs
Position
LG5:complement(8678823..8681050)
Genome browser
AA seq
431 aa
AA seq
DB search
MGDKDGVSIAETFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR
PEGKDYSVHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKI
EIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRG
HQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDVAW
HLLHESLFGSVADDQKLMIWDTRCNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD
KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQS
GEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPD
TPASELEAGAS
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacaaagacggtgtgtcaattgcagagacatttgatgatgctgttgaggagcgt
gtaattaatgaagagtataaaatatggaagaaaaatacaccatttttgtacgatctggtg
atgacccatgcattggaatggccatcattgacagctcaatggcttcctgatgtcactcgt
ccagagggtaaagattattctgttcaccgtttaatcttaggcacacatacatcagatgaa
caaaatcatttgctaattgcaagtgtacagttgccaaatgaggatgcccaatttgatgca
tctcattatgacaatgaaaagggtgaatttggtggttttggatcagtcagtggaaagatt
gaaattgaaataaaaataaatcatgaaggtgaagttaatcgtgctcgctatatgccacaa
aatccatgtgtcatcgcaacaaaaacaccatcaagtgatgtactcgtatttgattataca
aagcatccaagcaagcctgatccaaatggtgaatgtcatccagatttgcgtttgcgtgga
catcaaaaagagggctatggtttgtcatggaatccaaatttaaatggttatttgctcagt
gcatctgacgatcatactatttgtttgtgggatattaacgcaacaccaaaagaaaatcgt
gttattgatgcaaagacaatatttactggtcatactgctgttgttgaagatgttgcttgg
catttattacacgagtcactttttggctctgttgctgatgatcaaaaactcatgatttgg
gatacaagatgcaacaacaccagcaaaccaagtcatactgttgatgcacatactgctgaa
gtcaattgtttaagttttaatccatactctgaattcattttggcaactggtagtgctgat
aaaaccgttgctctttgggatcttagaaatttgaaactcaagttgcactcatttgagtct
cacaaagatgaaattttccaagttcaatggtcaccccataacgaaacaattcttgctagc
agtggaactgacagacgtcttcatgtctgggatctcagtaaaattggagaggaacaatct
ggagaagacgctgaggatggtccaccagaattactgtttattcatggaggacatactgct
aaaatcagtgatttttcatggaatccaaatgaaccatgggtcatttgctcagtttctgag
gacaacataatgcaagtttggcaaatggctgaaaatatttacaatgacgaagagcctgat
acaccagccagtgaactcgaagcaggagcatcataa
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