Aphidius gifuensis: 122858051
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Entry
122858051 CDS
T07796
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
agif
Aphidius gifuensis
Pathway
agif03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122858051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agif03021
]
122858051
03041 Spliceosome [BR:
agif03041
]
122858051
03036 Chromosome and associated proteins [BR:
agif03036
]
122858051
Transcription machinery [BR:
agif03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
122858051
Spliceosome [BR:
agif03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
122858051
Complex B
122858051
Complex C
U2 SnRNP specific factors
122858051
Chromosome and associated proteins [BR:
agif03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
122858051
TFTC complex
122858051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
122858051
NCBI-ProteinID:
XP_044016642
LinkDB
All DBs
Position
LG5:18464839..18470498
Genome browser
AA seq
1230 aa
AA seq
DB search
MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPTTGKVHTLLTVETFG
VIRSLMAFRLTGGTKDYIVIGSDSGRIVILEYIPAKNVFDKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAIEKQKLVYILNRDPEARLTISSPLEAHKSNTLVYHTVGVDVGFENP
MFACLEIDYEDADSDPTGDAAIKTQQTLTLYELDLGLNHVVRKYSEPLEEHANFLVSVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVATSMCVLKTGFLFIASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEDGDTFFFAPRPLRNLVLVDEMDSLSPILACQVADLANEDT
PQLYMACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRIDGRTTTNASSAAEE
FDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRA
DKRVNEWKAPGKKTIVKCAVNERQVVIALTGGELVYFEMDGTGQLNEYTERKKMPSEVMC
MALGKVPPGEQRSWFLAVGLQDNTVRIISLDPNDCLAPRSMQALPAAAESLCIVEMGASK
EVGGSDDNPIKQHSSLYLNIGLTNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIKMQ
GNQAVLAMSSRSWLSYYYQNRFHLTPLSYESLEYASGFSSEQCPEGIVAISTNTLRILAL
EKLGAVFNQVSFPLEYTPRKFSIHPESSNLIVIETEHNAYTEETKQQRRLQMAEEMQEAA
GAEEAAVARELAEAFLSEEPNEAVFGAPRAGPGLWASLIRIIVPTTGDTLNTYRLEQNYA
ALSLALVKFANQGDQLYLIVGVAKEYQLNPRISNGGFLYTYKVNAEGNQLELLHKTSVDE
VPLAICSYQGRVLVGVGRMLRLYDMGKKKLLRKCENKHIPNTVVSINAVGHRIYVSDVQE
SVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKYGNIAVVRLAHAINDDVD
EDPTGNKALWDRGLLNGASQKADTVASFHVGETVMSLQKATLIPGGSESLVYTTLSGTVG
VLVPFTSHEDHDFFQHLEMHMRSEHPPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSIEP
AKQKGISGDLERTPSEVSKKLEDIRTRYAF
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgtatctttacaatttaacacttcaacgtgccacaggcataacccacgctgttcatgga
aatttttctggcagtaaaatgcaagaaattcttgtatcacgtggtaaatcattggagtta
ttgaggcctgatccaacaactggaaaagttcatacattgctgactgttgaaacatttggc
gttattagatcgttgatggcatttaggttaactggaggcaccaaagattacatcgtcatt
ggttctgattctggaagaattgttattcttgaatatataccagctaaaaatgtatttgac
aaagttcaccaggagacttttggtaaaagtggctgtcgaagaattgtacctggtcaatat
cttgccattgatccaaaaggacgtgcagttatgataggagctattgaaaaacaaaagcta
gtctacattctcaatagagatccagaagcacgtcttacaatatcatcaccacttgaggca
cacaaaagtaatacacttgtttatcatactgttggtgttgatgttggatttgaaaatcca
atgtttgcatgtcttgaaattgattatgaagatgctgatagtgatccaactggtgatgct
gcaattaaaacacaacaaacattaacattgtatgagcttgatcttggtcttaatcatgtt
gttagaaaatacagtgaaccacttgaagaacatgcaaattttttggtatcagtacctggt
ggtaatgatggaccaagtggtgtattaatttgttcagaaaattatttaacatataaaaat
ttgggtgatcaacatgatatacgttgtccaattccaagaagaagaaatgatcttgatgat
ccagaacgaggaatgatatttgtttgttcagcaactcataaaacaaaaagtatgtttttt
tttcttgcacaaactgaacaaggtgatatatttaaaataacacttgaaacagatgaagat
atggttactgaaattaaattaaaatattttgatactgtacctgttgcaacaagtatgtgt
gtattaaaaactggatttttatttattgcatctgaatttggtaatcattatttatatcaa
attgctcatcttggtgatgatgatgacgagccagaatttagttcagcaatgccattagaa
gatggtgatacattcttcttcgcaccaagacctctgagaaatcttgttcttgttgatgag
atggatagtttatcaccaattttagcttgtcaggttgctgatttagcaaatgaagataca
ccacaattatacatggcatgtggaagaggaccaagatcatcacttcgtgtattacgtcat
ggtcttgaagtatcagaaatggctgttagtgaacttcctggtaatccaaatgccgtatgg
actgttaaaagaagaattgatggaagaacaacaacaaatgcatcatcagctgctgaagaa
tttgatgcttatattattgtatcatttgttaatgcaacacttgtattgagtattggtgaa
actgttgaagaagttactgattctggttttcttggtacaacaccaactctcagttgttct
gctcttggtgaagatgctcttgtacaggtttatccagatggcatcagacatattagagct
gataaacgtgtcaatgaatggaaagcaccaggaaaaaaaacaattgtcaaatgtgctgtt
aatgaacgacaagttgttattgctttaactggtggtgaattggtctactttgaaatggat
gggactggacaattgaatgaatacactgaacgtaaaaaaatgccatcagaagtaatgtgt
atggctttgggaaaagtaccacctggtgaacaaagatcatggtttttggctgttggtctt
caagataacacagttagaataatatcattagatccaaatgattgtttagcaccaagaagt
atgcaagcattaccagcagctgctgaaagtctttgtattgttgaaatgggtgcatcaaaa
gaagttggtggttctgatgataatccaataaaacaacattcaagtctttatttaaatatt
ggtttaacaaatggtgtattattgagaacagttcttgatccaatatctggtgatttagct
gatacaagaacaagatatcttggttcacgaccagttaaattatttagaattaaaatgcaa
ggtaatcaagctgttcttgcaatgagtagtagatcatggttaagttattattatcaaaat
cgttttcatttaacaccattatcatatgaaagtcttgaatatgcatctggttttagttca
gaacaatgtccagaaggtattgttgcaatatcaacaaatacattgagaattttagcactt
gaaaaattaggtgctgtatttaatcaagttagttttccacttgaatatacaccacgtaaa
ttttcaattcatccagaatcatcaaatttaattgtcattgaaactgaacataatgcatat
actgaagaaacaaaacaacaaagacgtttacaaatggctgaagaaatgcaagaagctgct
ggagctgaagaagctgctgttgcacgagaattagctgaagcatttttatctgaagaacca
aatgaagctgtatttggtgcaccaagagctggacctggtttatgggcatcattaattaga
attattgttccaacaactggtgatactctaaatacatatagacttgaacaaaattatgct
gcattaagtttagcacttgttaaatttgccaatcaaggtgatcaactttatttaattgtt
ggtgttgcaaaagaatatcaattgaatcctcgtattagcaatggaggatttttatataca
tacaaagttaatgctgaaggtaatcaattagaattattacataaaacatcagttgacgag
gttccacttgctatatgttcatatcaaggcagagtattagttggtgttggtcgtatgttg
agattatatgatatgggaaagaaaaagttgttacgtaaatgtgaaaataaacatatacca
aatacagttgtatcaataaatgctgttggtcatagaatatatgttagtgatgtacaagaa
tcagtatatgctgtacgttataaaagacaagaaaatcaattaattgtatttgctgatgat
acacatccaagatggataacaacaacttgtgtattggattatgatacagttgcaactgca
gataaatatggtaatattgctgttgttagacttgcacatgcaattaatgatgatgttgat
gaagatccaactggtaataaagcattatgggatcgtggtttattaaatggtgcaagtcaa
aaagctgatactgttgcatcatttcatgttggtgaaacagttatgtcattacaaaaagca
acacttatacctggtggttcagaaagtttagtttatacaacattaagtggtacagttggt
gtacttgtaccatttacaagtcatgaagatcatgatttttttcaacatcttgaaatgcat
atgagatctgaacatccaccactttgtggtagagatcatttgtcatttagatcgtactat
tatccagttaaaaatgtcattgatggtgatttatgtgaacaatttaattcaattgaacca
gctaaacaaaagggtatatctggtgatttagaaagaacaccatctgaagtatctaaaaaa
cttgaagatatcagaacacgatatgcattttaa
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integrated database retrieval system