Aphidius gifuensis: 122858067
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Entry
122858067 CDS
T07796
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
agif
Aphidius gifuensis
Pathway
agif03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122858067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agif03400
]
122858067
DNA repair and recombination proteins [BR:
agif03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
122858067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
Rab15_effector
AAA_27
DUF5365
ANC1_spectrin
Motif
Other DBs
NCBI-GeneID:
122858067
NCBI-ProteinID:
XP_044016673
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All DBs
Position
LG5:complement(17551951..17560103)
Genome browser
AA seq
927 aa
AA seq
DB search
MGDDIQDEPNTRFGMDAIAQQMFVRFFKGLPEKSDSTVRFFNRVDYYSCHGSDGLFAARE
VFKSTSACKQLGVEPNKIDGVCLSKTRFETFVKELLLVKRYRVEVYVNKGTNRNQQWSLE
FKGSPGNLSQFEDILFVNSDIGIGTSIIAVKLGSEGKSRLVGVSCVDPLTTVISVCEFLD
DESYSDLEALVVTTSPKECLLLSAEGNKEFQNIKDVMERNNVLVTLRKKNDFSTDSLIQD
LNSLLKFKKGQQENSQALPETSLDHAMSSTAALIKYLDLTSDAANINQYRIKQLERSRYL
KLDGAAIKALNIDPPPGLQSVVSGGSTTSIQGLLDKCRTPLGHRLVSQWVRQPLKDLALI
KERHDIVEQLVNNNDLRKVLSEDHLRRVPDLEQLAKKVARKNGSLQDCYKIYMCLMHIPI
ILETLSSSDDNTAAMKTLIIEPLKELISDLEKFQEMVEQTIDLESSDSGEFLVKPEFNED
LKDMKETMENLKNKMEKEIKKVGDDLNFDVGKTIKLDSTLEQGYFFRVTLKEEVNLRNNK
KYEIFETHKSGVKFRSYRMTEINTDYLSTRNKYEEEQKSVVIEILQIAASYSNLIKSVAS
TIAILDVLTAFAIAAVNSTNIFVRPNMVSSEEGILNIKQARHPCLDTQPDVHYIANDCAF
KRDESQFFIITGPNMGGKSTYMKSVGVVALMAHIGSFVPCEEATISLLDCILARVGADDS
QEKGVSTFMIEMVETATILKTATSNSLVIIDELGRGTSTYDGRGIAWSIAEYLAKEIKPY
CLFATHFHEIARLAEDVPTVKNYHVSAIVEKDDIIFLYTVKPGICDQSFGIHVAKMVNFP
SDIIKFAEKKQAELEDGENISFKGYKNAEEKRKIVAEGEKLIAKFVTKCKELDESLSEKE
LLDKITSYKNETIASGNPYIAALLAEA
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacgatatacaagatgaaccaaacacacgatttggaatggatgcaattgcacag
caaatgtttgtgagatttttcaaaggtcttcctgagaaatcagacagtactgttcgattt
tttaatcgtgttgattattattcgtgtcatggaagtgatggattgtttgctgctcgtgag
gtgttcaagtcaacatcagcctgcaaacaacttggtgttgaaccaaataaaattgatgga
gtttgtctcagtaaaactagatttgaaacatttgtcaaagagttattgttggttaaaaga
tatcgagttgaagtttatgtcaacaaaggaacaaatagaaatcaacaatggtcattagaa
tttaaaggttcacctggtaatttatcacaatttgaagatattttatttgttaattctgac
attggcattggtacatcaataattgctgttaaattaggatcagaaggaaaatccaggctc
gttggtgttagttgtgttgatccactaacaacagtcatatcagtctgtgaatttttagat
gatgaatcatactctgatcttgaagctcttgtcgtaacaacttcaccaaaagaatgtctt
ttattatcagctgaaggaaataaagaatttcaaaatatcaaagatgttatggaaagaaat
aatgtactggtaacattgagaaaaaaaaatgatttttcaacagattcattaattcaagat
ttaaattcattgcttaaatttaaaaaaggacaacaagaaaattcacaagcactaccagaa
acaagtttagatcatgcaatgtcatcaacagcagcattaataaaatatttagatttaaca
tcagatgcagcaaatattaatcaatacagaataaaacaacttgaacgttcacgttatctt
aaacttgatggagcagcaataaaagctcttaatattgatccaccacctggtttacaatca
gttgttagtggtggatcaacaacaagtatacaaggattattagataaatgtagaactcct
ttgggtcatcgtcttgtttctcaatgggtcagacaaccacttaaagatttggcattaata
aaagaacgtcatgatattgttgaacaattagttaataataatgatttacgtaaagtttta
agtgaagatcatcttcgtcgtgttcctgatttagaacaattggctaaaaaagttgcacgt
aaaaatggtagtcttcaagattgctataaaatttatatgtgtttaatgcatataccaatt
attttagaaacattatcatcatctgatgataatactgctgcaatgaaaacacttattatt
gaaccacttaaagaattaataagtgatttagaaaaatttcaagaaatggttgaacaaaca
attgatcttgaatcatctgattctggtgaatttcttgttaaaccagaatttaatgaagat
ttaaaagatatgaaagaaacaatggaaaatttaaaaaataaaatggaaaaagaaattaaa
aaagttggtgatgatttaaattttgatgttggaaaaacaattaaacttgatagtacatta
gaacaaggttatttctttcgtgttacattaaaagaagaagttaatttacgtaataataaa
aaatatgaaatatttgaaactcataaatctggtgttaaatttagaagttatagaatgaca
gaaattaatactgattatttatcaacaagaaataaatatgaagaagaacaaaaaagtgtt
gttattgaaattttacaaattgctgctagttatagtaatttaataaaatcagttgcatca
acaattgcaatattggatgtattaactgcatttgcaatagcagctgttaattcaacaaat
atatttgttcgtccaaatatggtatcaagtgaagagggtatattaaatattaaacaagca
agacatccatgtcttgatacacaacctgatgttcattatattgcaaatgattgtgccttt
aaacgtgatgagagtcaattttttataattactggaccaaatatgggtggtaaaagtaca
tatatgaaatctgttggtgttgttgcattgatggcacatattggaagttttgtaccatgt
gaagaagcaacaatatcattgttagattgtatattagcaagagttggtgctgatgattca
caagaaaaaggagtatcaacatttatgatagaaatggttgagacagcaactattcttaaa
actgctacttcaaattcattggtaattattgatgaacttggacgtggaacatcaacatat
gatggtcgtggtattgcttggtcaattgctgaatatttagctaaagaaattaaaccatac
tgtttatttgctacacattttcatgaaattgcaagacttgctgaagatgtaccaactgtt
aaaaattatcatgtttctgcaattgttgaaaaagatgatattatatttttatatactgtt
aaacctggtatatgtgatcaaagttttggtattcatgttgcaaaaatggttaattttcca
tctgatatcattaaatttgctgaaaaaaaacaagctgaactagaagatggtgaaaatatt
tcatttaaaggatacaaaaatgctgaagaaaaaagaaaaattgttgctgaaggagaaaaa
ttaattgctaaatttgtaacaaagtgtaaagaacttgatgaatccctgagtgaaaaagaa
cttttggataaaattacttcatacaaaaatgaaacaattgccagtggaaatccttacatc
gctgctttactagctgaagcataa
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