Aphidius gifuensis: 122858640
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Entry
122858640 CDS
T07796
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
agif
Aphidius gifuensis
Pathway
agif03008
Ribosome biogenesis in eukaryotes
agif03013
Nucleocytoplasmic transport
agif03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122858640
03015 mRNA surveillance pathway
122858640
03008 Ribosome biogenesis in eukaryotes
122858640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agif03019
]
122858640
03009 Ribosome biogenesis [BR:
agif03009
]
122858640
Messenger RNA biogenesis [BR:
agif03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122858640
mRNA cycle factors
Stress granule specific factors
122858640
Ribosome biogenesis [BR:
agif03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
122858640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
TAP_C
Tap-RNA_bind
NTF2
LRR_8
UBA_8
LRR_4
UBA_4
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
122858640
NCBI-ProteinID:
XP_044017569
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All DBs
Position
LG6:840607..842683
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AA seq
522 aa
AA seq
DB search
MMQIKPNPMQLDISSFGNFEKKGAMQKEKALISRNDVWHKIVIINGTKYDKEYLLKTILN
AVHPADMIPVRYQTTGCDTFFIARNCSAAIEKLCENKLLIKVINKEPIILNITLAYASVA
DLKISIKPLILSSLIKRYDKQKCLINLENFHRDDELLKNVYCPISQVRTFNHVLKLIETS
TTPSFVSLTMLNLKNNNLTTLAAFENANLNTLNYLDIRNNLLIDINTLGPLVRMPIKILY
LDGNPLCENYSNAQLYINSVKKYCGKLKKLDGITIEDIDLPNIYESYLPDRNIECLVKLF
TSHFFTLHDQNDKSIMYGLYHDDALYSVTAKSCEKNDVNDVKSYFNINRNLIQDNSFNMN
DKLIYHGPDEIIKILGQQNFCIHDKNSFSYDLIFMNKDKIIFTVYGLLVTSPNSRSFNFN
RTFVLLKIYNEYKILNDMYHIGDYLPNVMANLNNYNIDYTYKPQWLSRNEKNILIKKFMK
LSTLNEVSSMKLLEANNWNIKKAVIQFVKKYKSSGIPAEAFM
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaattaaaccaaatccaatgcagctcgacatttcgtcgtttggaaatttcgaa
aaaaaaggtgcaatgcaaaaagaaaaagccctgatatcaagaaatgatgtctggcataaa
atagtaataataaatggtacaaaatatgacaaagaatatttactaaaaacaatattaaat
gcagtacatccagcagacatgataccagtacgttatcaaacaacaggttgtgacacattt
ttcatagcaagaaattgtagtgcagcaattgaaaagctatgtgaaaataaattactaatt
aaagtaataaataaagaaccaataatattaaatataacacttgcatatgcatcagttgct
gatttaaaaatcagcataaagccattaatattatcatcattaataaaaagatatgataaa
caaaaatgtttaattaatttagaaaattttcatcgtgatgatgaattgcttaaaaatgtt
tattgtccaatatcacaagtacgtacatttaatcatgtattaaaactcattgagacatca
acaacaccatcatttgtctcattgacaatgttaaatttaaaaaataataatttaacaaca
ttagctgcatttgaaaatgcaaatttaaatacacttaattatttagatattagaaataat
ttacttattgatattaatacacttggtccattagttagaatgccaattaaaattttatac
cttgatggcaatccactgtgtgaaaattattcaaatgctcaattatatatcaattcagtt
aaaaaatattgtggaaaattaaaaaaacttgatggtattactattgaggatatagattta
ccaaatatttatgaatcatatttacctgatagaaatattgagtgtcttgttaaattattt
acaagtcattttttcacacttcatgatcagaatgataaatccatcatgtatggcttgtat
catgatgatgcgctgtattcagttacagctaaatcatgtgaaaaaaatgatgttaatgat
gtcaaatcgtactttaatataaatagaaatttaattcaagataatagttttaatatgaat
gacaaattaatatatcatggacctgatgagattattaaaatactgggtcaacaaaatttt
tgtattcatgataaaaattcatttagctatgatttaattttcatgaataaagacaaaata
atattcacagtttatggattgctagtaacaagtccaaattcaagaagctttaattttaat
cgtacatttgttttgttgaaaatttataatgaatataaaattttaaatgatatgtatcat
attggtgattatttgccaaatgtaatggcaaatttaaataattataatattgattataca
tacaaaccacagtggctaagtcgaaatgaaaagaatatattaattaaaaaatttatgaag
ttgtcaacgttgaatgaagtgtcatcaatgaaattgcttgaagctaataattggaatatt
aaaaaagctgttatacaatttgttaaaaaatataaatcatctgggattccagctgaggca
tttatgtaa
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