Aphidius gifuensis: 122858675
Help
Entry
122858675 CDS
T07796
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
agif
Aphidius gifuensis
Pathway
agif03030
DNA replication
agif03420
Nucleotide excision repair
agif03430
Mismatch repair
agif03440
Homologous recombination
agif03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122858675
03420 Nucleotide excision repair
122858675
03430 Mismatch repair
122858675
03440 Homologous recombination
122858675
03460 Fanconi anemia pathway
122858675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
agif03000
]
122858675
03032 DNA replication proteins [BR:
agif03032
]
122858675
03400 DNA repair and recombination proteins [BR:
agif03400
]
122858675
Transcription factors [BR:
agif03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122858675
DNA replication proteins [BR:
agif03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
122858675
DNA repair and recombination proteins [BR:
agif03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
122858675
MMR (mismatch excision repair)
122858675
DSBR (double strand breaks repair)
HR (homologous recombination)
122858675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Evr1_Alr
Motif
Other DBs
NCBI-GeneID:
122858675
NCBI-ProteinID:
XP_044017670
LinkDB
All DBs
Position
LG6:1459358..1462166
Genome browser
AA seq
619 aa
AA seq
DB search
MIPLSKGAITRIMKGDEVDKPIVQILSIKKLASGGSAGADRYRLLISDGDVLSSFTMLAT
QLNSMVTENTIDIYAIIEISRYAMSKANTGGGHAKTIMIVLGIEVKVKGDVVKCKIGDPV
NYELTVGSSDTNSSSAASAASAAPAAPAAASINGNSSTLQLNNRVVPPANRLNDSLNAGM
EIQTTPIAALSPYQNKWVIKARVSNKSDIKIWNNSRSSGKLFNMELIDESGEIRCTVFQE
QVDKFFDMIEIQKLYYISRASIKMANKQYNSLKNDYEMSLTGDSEIIACNEESDAIPLMT
YEFVPIKEIENMEKDTMVDILGIVKSADNLVELTSKAGKEFKKRDIHLIDESKVLISLTL
WGNQAENFQSNSNPVIAIKSAKIGEFNGGKTLSAQMSSVLQIDPDIPQAHALRGWFASID
ANSEEIQSLSKTNSAGGMSGNWSMIREATARGMQARDMPETFICKAMINMVRTDNIMYKA
CPSDNCNKKVIDNDGVYRCEKCNQDYQNYKPRLLANMAISDWSSSVWATAFHDDVERMVG
LSAQELQELQQVNSDEFNKKITSLAFQPFLFKLRMKMGMYNDQPKMNTSISAVTPVDYKA
YNKHLLKKIKEAANITTSK
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgattccattatcaaaaggagccataacccgaattatgaaaggagatgaagtagacaag
ccaattgtccaaatattgagtatcaaaaaattggcatctggtggaagtgccggtgctgat
cgttatcgtttgttaatatctgatggtgatgttttgagttcattcacaatgttggcaact
caattgaactccatggtaacagaaaatacaattgatatatatgctattattgaaatatca
cgttatgccatgagtaaagcaaatactggtggtggacacgctaaaacaataatgatagta
cttggtattgaagttaaagtcaagggtgatgttgttaaatgtaaaattggtgatccagtt
aattatgaattaacagttggttcatctgatacaaattcatcatcagcagcatcagcagca
tcagctgcaccagctgcaccagctgcagcttctattaatggaaattcatcaacactacaa
ctaaacaatcgtgtggttccaccagcaaatcgtttaaatgattcattaaatgctggaatg
gaaatacaaacaacaccaattgctgcattaagtccatatcaaaacaaatgggtcatcaaa
gcacgtgttagcaataaatctgatattaaaatatggaataattcacgtagtagtggtaag
ctatttaacatggaactcattgatgaaagtggagaaatacgttgtacagtatttcaagaa
caagttgataaattttttgatatgattgaaatacaaaaattatattatatatcacgtgca
tcaataaaaatggcaaacaaacaatacaattcattgaaaaatgattatgaaatgtcatta
actggtgattcagaaattatagcatgtaatgaagaaagtgatgcaattccattaatgaca
tatgaatttgtaccaattaaagaaattgaaaatatggaaaaagatacaatggttgatatt
ttgggaattgttaaaagtgctgataatcttgttgagttaacatcaaaagctggaaaagaa
tttaaaaaaagagacatacatttaattgatgaaagtaaagtattaatttcattaacatta
tggggtaatcaagctgaaaattttcaatcaaatagtaatccagttattgctattaaatca
gcaaaaattggtgaatttaatggtggtaaaacattatcagcacaaatgtcatctgtactt
caaattgatccagatataccacaagctcatgctcttcgtggatggtttgcaagtattgat
gctaattctgaggaaattcaatcattgtcaaaaacaaattctgctggtggaatgagtggt
aattggtcaatgataagagaggctacagctagaggtatgcaagctcgtgatatgcctgaa
acatttatttgtaaagcaatgattaatatggttcgtacagacaatattatgtacaaagct
tgtccaagtgataattgtaacaaaaaagttattgacaatgatggtgtgtacagatgtgaa
aaatgtaatcaagattatcaaaattataaaccacgtttgttggctaatatggctatttct
gactggtcatcatctgtttgggcaacagcatttcatgatgatgttgaacgaatggttgga
ttatcagcacaagaacttcaagaattacaacaagttaattctgatgaatttaataaaaaa
attacaagtcttgcattccagccatttttatttaaactcagaatgaagatgggaatgtat
aatgatcaaccaaaaatgaatacatctatttctgctgttaccccagttgattacaaggct
tacaataagcatttactcaagaaaattaaagaagctgcaaatatcactacaagtaaataa
DBGET
integrated database retrieval system
