Aphidius gifuensis: 122859380
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Entry
122859380 CDS
T07796
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
agif
Aphidius gifuensis
Pathway
agif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122859380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agif03019
]
122859380
Messenger RNA biogenesis [BR:
agif03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122859380
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
122859380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
122859380
NCBI-ProteinID:
XP_044018869
LinkDB
All DBs
Position
LG6:9180871..9182130
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AA seq
275 aa
AA seq
DB search
MDHDLVQDHGGLRVDGRKPLELRQIRVRMGVFGQADGSAYLEQGKTKILATVYGPHQPRG
AAARSTANKSTKGLVNCQYSMAVFCLSSGERKRRPRGDKKTQERSIQLRHAMEAILNLET
FPRSQIDIFIEVLQVDGGDYCAAVNAATIALIDAGIPIKDYAIGCTVTLPDSSVKYDDEI
GGIGILDANNLEEYGPGVTLSVVALPETINEVTKEPGLIVIAQGSGQRLHLSKLEGMKSR
ALFGCMNIKKILDLAVRQHLNSNSLPSLFNVHTLE
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggatcatgatttagtacaagatcatggtggtttacgtgttgatggtagaaaaccactg
gaattacgtcaaattcgtgttagaatgggtgtatttggacaagctgatggtagtgcatat
ttagaacaaggaaaaacaaaaatattagctactgtttatggtccacatcagccaagaggt
gcagcagcaagaagtactgcaaataaatcaacaaaaggtcttgttaattgtcaatacagt
atggctgtattttgtttaagttctggtgaaagaaaaagaagaccaagaggtgataaaaaa
actcaagaaagatcaatacaacttagacatgccatggaagcaatattaaatcttgaaaca
tttccacgttcacaaattgatatatttattgaagtacttcaagttgatggtggtgattat
tgtgctgctgttaatgcagcaacaattgcacttattgatgctggtataccaataaaagat
tatgctattggttgtacagtaacattaccagattcatcagttaaatatgatgatgaaatt
ggtggtattggtatacttgatgcaaataatcttgaagaatatggaccaggtgttacatta
tctgttgttgcattaccagaaacaattaatgaagttacaaaagaaccaggtcttattgtt
attgctcaaggttctggacaacgtcttcatcttagtaaacttgaaggaatgaaaagtaga
gcattatttggttgtatgaatattaaaaaaattcttgatttagctgttagacaacatctt
aattcaaattcacttccatcattatttaatgtacatactttagaataa
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