Aphidius gifuensis: 122859466
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Entry
122859466 CDS
T07796
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
agif
Aphidius gifuensis
Pathway
agif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122859466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agif03019
]
122859466
Messenger RNA biogenesis [BR:
agif03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122859466
mRNA degradation factors
5'-3' decay
Lsm complex
122859466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
122859466
NCBI-ProteinID:
XP_044019005
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All DBs
Position
LG6:complement(10984690..10985789)
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AA seq
134 aa
AA seq
DB search
MDIVPGTASLLDELDKKLMVLLRDGRTLIGYLRSVDQFANLVLHPTIERIHVGKQYGDIP
RGVFIVRGENVVLLGEIDREKEKDHSLSEVSVDDILDAQRREQESKQDQSRLHNKALKER
GLNFVPDLGHDDMF
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atggatattgtcccaggaactgcatctcttcttgatgagcttgacaaaaaattgatggta
ttattgagagatggacgaacattaattggttatttacgatctgtcgatcagtttgcaaat
ttggtacttcatcctacaattgaaaggattcatgtcggcaaacaatatggggatataccc
agaggtgtttttattgttcgtggtgaaaatgttgttctcttaggtgaaattgatagggaa
aaagaaaaagatcattctttgtcagaagtttcagttgacgatatattagatgctcaaaga
agagaacaagaatcaaaacaggatcaaagtcgtcttcacaataaagcactcaaagaaaga
ggattaaattttgttcctgatcttggacatgatgatatgttttga
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