Aggregatibacter sp. oral taxon 513: J5A60_00255
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Entry
J5A60_00255 CDS
T08731
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
agj
Aggregatibacter sp. oral taxon 513
Pathway
agj03030
DNA replication
agj03410
Base excision repair
agj03420
Nucleotide excision repair
agj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J5A60_00255 (polA)
03410 Base excision repair
J5A60_00255 (polA)
03420 Nucleotide excision repair
J5A60_00255 (polA)
03440 Homologous recombination
J5A60_00255 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agj03032
]
J5A60_00255 (polA)
03400 DNA repair and recombination proteins [BR:
agj03400
]
J5A60_00255 (polA)
Enzymes [BR:
agj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J5A60_00255 (polA)
DNA replication proteins [BR:
agj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
J5A60_00255 (polA)
DNA repair and recombination proteins [BR:
agj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
J5A60_00255 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J5A60_00255 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QUC05927
LinkDB
All DBs
Position
49126..51924
Genome browser
AA seq
932 aa
AA seq
DB search
MAQIAANPLVLVDGSSYLYRAFHAFPPLTNSNGEPTGAMYGVLNMLKSLISQVQPSHIAV
VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGVEADDVIGT
LACQASKNGQKVLISTGDKDMAQLVDDNIMLINTMNNSLLDRDGVIEKYGIPPELIIDYL
ALMGDSSDNIPGVSGVGEKTALGLLQGIGSMAQIYANLDKVAELPIRGAKKLGEKLLAEK
DMADLSYALATIKTDVALAFSPQELALGDSNNDALIEYFGRYEFKRWLGEVMNGASSVTQ
PTQSVKVNPYQATPAVKTNESAVENSIKFKIDRSRYENILTEADLARWVEKLSAEKLIAV
DTETDGLDYMSAKLVGVSFALENGEAAYLPLHLDYLGAPKTLEKSTALGALKPILENPNI
GKVGQNLKFDMTIFARNGIALQGIEFDTMLLSYTLDSTGRHNMDDLAKRYLGHQTIGFED
IAGKGKNQLTFNQIPLEQAGEYAAEDADVTMKLQQVLWEKLQSQPSLVELYQSIELPLLG
VLSRMERCGVLIDSDALFLQSNEITERLAALEMQAHELAGQPFNLASTKQLQDILFDKLG
LPVLQKTPKGAPSTNEEVLEELAYSHELPKVLVEHRGLSKLKSTYTDKLPQMVNSQTGRV
HTSYHQAVTATGRLSSSDPNLQNIPIRNEEGRRIRQAFIARDGYKIIAADYSQIELRIMA
HLSNDTGLINAFAQGKDIHRSTAAEIFGLPLEQVTSEQRRNAKAINFGLIYGMSSFGLSR
QLGISRADAQRYMDLYFQRYPGVQTFMHDIREKAKAQGYVETLFGRRLYLPEINSSNAMR
RKGAERVAINAPMQGTAADIIKRAMIKLDEITRDNPDIHMIMQVHDELVFEVRSEKIAFF
SELIKQHMEAAAELVVPLIVDVGVGENWDEAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaattgctgcaaatccccttgtcctcgtggacggttcttcttatttataccgc
gcctttcacgctttccctccgcttaccaactccaacggtgaaccgacaggcgccatgtat
ggtgtgctgaatatgttgaaaagcttgatctcacaggttcagccaagtcatattgcggtg
gtgtttgatgccaaaggcaaaaccttccgcgatgaaatgtttgagcaatataaatctcac
cgtccgccgatgccggacgatctgcgcaaacaaattcagccgttgcatgacatgatccgg
gcattaggcattccgctgttggtggtggaaggcgtagaagcggatgatgtgatcggcaca
ttggcgtgccaagcctcaaaaaacgggcagaaggtacttattagtacgggcgacaaagat
atggcacagctggtggacgacaacattatgttgattaataccatgaacaacagcttgctg
gatcgtgatggcgtgattgaaaaatacggtattccgccggagttaattattgattatctg
gcattgatgggcgacagctccgacaacattcccggtgtctccggcgtaggcgaaaaaaca
gcgctagggcttttgcagggcatcggcagcatggcacaaatttatgccaatctggataaa
gtcgccgaactgccgattcgtggtgcgaagaaactcggtgaaaaattgcttgctgaaaaa
gacatggcagatttgtcctacgcgttggcaaccatcaaaaccgacgtggcattggcattt
tctccgcaagaacttgcgcttggtgacagcaacaatgatgccttaatcgaatatttcggg
cggtatgaattcaaacgctggctaggcgaggtgatgaacggcgccagttccgtaactcaa
ccgacgcaatcggtgaaagttaacccttatcaagcgacgccggcagtcaaaaccaatgaa
agtgcggttgaaaattccattaaatttaagattgaccgcagccgctatgaaaatattctg
actgaagcggatttagctcgttgggtggaaaaattgagtgccgagaaactgatcgcggtg
gacaccgaaaccgacgggctggattatatgtccgctaagttggtcggcgtgtcttttgcg
ttagaaaatggcgaagcggcgtatttaccgttgcatttggattatctcggagcgccaaaa
acgctcgaaaaaagcaccgcacttggtgccctcaaacccattttagagaatccgaatatc
ggtaaagtcggacagaatctcaagtttgatatgaccattttcgcccgcaacggcattgcg
ttgcagggcattgaattcgacaccatgttgctttcttacaccttggacagcaccggtcga
cacaacatggacgacttagctaagcgttatctcgggcaccaaaccattggctttgaagac
attgccggcaaagggaaaaatcagctgacgttcaaccaaatcccgctagagcaagcaggc
gaatacgcggcggaagatgccgacgtgaccatgaaattgcaacaagtgttgtgggaaaaa
cttcagtcgcaacccagtttggtggaactctatcagtccatcgaattgccgttgcttggc
gtgttgtcgcgtatggagcgttgcggcgtactgattgattctgatgcactgttcctgcag
tccaacgaaattaccgaaagattggccgcacttgaaatgcaggcgcacgaactggcgggg
caaccgttcaatttggcgtccacgaaacagttgcaagacattctgttcgataaactcggc
ttgccggtgttgcaaaaaacgccgaaaggcgcaccgtccaccaatgaagaagtgttggag
gaactggcgtacagccacgaattgccgaaagtgttggtggaacatcgcggtttgagcaaa
ctgaaatccacttacaccgacaaattgccgcaaatggtgaactcgcaaaccgggcgcgtg
cacacctcttaccatcaagccgtaacggcaaccgggcggctttcttccagtgatccgaat
ttgcagaatattcctattcgtaacgaggaaggccgtcgcattcgccaagcctttattgcc
cgcgacggttataaaattattgccgcagactactcgcaaatcgagctgcgcattatggcg
catttgtccaacgataccggtttgattaatgcgttcgcgcaaggcaaagatattcaccgt
tccaccgcggcggaaattttcggtttgccgttggaacaggtgacgagcgaacaacgccgc
aacgcgaaagccattaactttgggctgatttatggtatgtcctctttcgggctttcccgt
cagcttgggatttcccgcgcggatgcgcaacgctacatggatttgtatttccaacgttac
ccgggcgtgcaaacctttatgcacgacattcgtgagaaggcgaaagcgcaaggctatgtg
gaaaccttgttcggacgccgtttgtatttgccggaaatcaattcttccaacgccatgcgt
cgtaaaggcgcagaacgggttgcgattaacgcgccaatgcaaggcaccgccgccgacatc
atcaaacgcgccatgattaaattggatgaaattacgcgtgataatccggatattcacatg
atcatgcaggtgcacgatgaattggtgtttgaagtgcggtcagaaaaaatcgcgtttttt
agcgagctcatcaaacaacatatggaagcggccgctgagcttgtggtgccgctgattgtg
gatgtcggcgtgggcgagaattgggacgaagcccactaa
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