KEGG   Aggregatibacter sp. oral taxon 513: J5A60_00255
Entry
J5A60_00255       CDS       T08731                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
agj  Aggregatibacter sp. oral taxon 513
Pathway
agj03030  DNA replication
agj03410  Base excision repair
agj03420  Nucleotide excision repair
agj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:agj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    J5A60_00255 (polA)
   03410 Base excision repair
    J5A60_00255 (polA)
   03420 Nucleotide excision repair
    J5A60_00255 (polA)
   03440 Homologous recombination
    J5A60_00255 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:agj03032]
    J5A60_00255 (polA)
   03400 DNA repair and recombination proteins [BR:agj03400]
    J5A60_00255 (polA)
Enzymes [BR:agj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     J5A60_00255 (polA)
DNA replication proteins [BR:agj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     J5A60_00255 (polA)
DNA repair and recombination proteins [BR:agj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     J5A60_00255 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     J5A60_00255 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_5
Other DBs
NCBI-ProteinID: QUC05927
LinkDB
Position
49126..51924
AA seq 932 aa
MAQIAANPLVLVDGSSYLYRAFHAFPPLTNSNGEPTGAMYGVLNMLKSLISQVQPSHIAV
VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGVEADDVIGT
LACQASKNGQKVLISTGDKDMAQLVDDNIMLINTMNNSLLDRDGVIEKYGIPPELIIDYL
ALMGDSSDNIPGVSGVGEKTALGLLQGIGSMAQIYANLDKVAELPIRGAKKLGEKLLAEK
DMADLSYALATIKTDVALAFSPQELALGDSNNDALIEYFGRYEFKRWLGEVMNGASSVTQ
PTQSVKVNPYQATPAVKTNESAVENSIKFKIDRSRYENILTEADLARWVEKLSAEKLIAV
DTETDGLDYMSAKLVGVSFALENGEAAYLPLHLDYLGAPKTLEKSTALGALKPILENPNI
GKVGQNLKFDMTIFARNGIALQGIEFDTMLLSYTLDSTGRHNMDDLAKRYLGHQTIGFED
IAGKGKNQLTFNQIPLEQAGEYAAEDADVTMKLQQVLWEKLQSQPSLVELYQSIELPLLG
VLSRMERCGVLIDSDALFLQSNEITERLAALEMQAHELAGQPFNLASTKQLQDILFDKLG
LPVLQKTPKGAPSTNEEVLEELAYSHELPKVLVEHRGLSKLKSTYTDKLPQMVNSQTGRV
HTSYHQAVTATGRLSSSDPNLQNIPIRNEEGRRIRQAFIARDGYKIIAADYSQIELRIMA
HLSNDTGLINAFAQGKDIHRSTAAEIFGLPLEQVTSEQRRNAKAINFGLIYGMSSFGLSR
QLGISRADAQRYMDLYFQRYPGVQTFMHDIREKAKAQGYVETLFGRRLYLPEINSSNAMR
RKGAERVAINAPMQGTAADIIKRAMIKLDEITRDNPDIHMIMQVHDELVFEVRSEKIAFF
SELIKQHMEAAAELVVPLIVDVGVGENWDEAH
NT seq 2799 nt   +upstreamnt  +downstreamnt
atggctcaaattgctgcaaatccccttgtcctcgtggacggttcttcttatttataccgc
gcctttcacgctttccctccgcttaccaactccaacggtgaaccgacaggcgccatgtat
ggtgtgctgaatatgttgaaaagcttgatctcacaggttcagccaagtcatattgcggtg
gtgtttgatgccaaaggcaaaaccttccgcgatgaaatgtttgagcaatataaatctcac
cgtccgccgatgccggacgatctgcgcaaacaaattcagccgttgcatgacatgatccgg
gcattaggcattccgctgttggtggtggaaggcgtagaagcggatgatgtgatcggcaca
ttggcgtgccaagcctcaaaaaacgggcagaaggtacttattagtacgggcgacaaagat
atggcacagctggtggacgacaacattatgttgattaataccatgaacaacagcttgctg
gatcgtgatggcgtgattgaaaaatacggtattccgccggagttaattattgattatctg
gcattgatgggcgacagctccgacaacattcccggtgtctccggcgtaggcgaaaaaaca
gcgctagggcttttgcagggcatcggcagcatggcacaaatttatgccaatctggataaa
gtcgccgaactgccgattcgtggtgcgaagaaactcggtgaaaaattgcttgctgaaaaa
gacatggcagatttgtcctacgcgttggcaaccatcaaaaccgacgtggcattggcattt
tctccgcaagaacttgcgcttggtgacagcaacaatgatgccttaatcgaatatttcggg
cggtatgaattcaaacgctggctaggcgaggtgatgaacggcgccagttccgtaactcaa
ccgacgcaatcggtgaaagttaacccttatcaagcgacgccggcagtcaaaaccaatgaa
agtgcggttgaaaattccattaaatttaagattgaccgcagccgctatgaaaatattctg
actgaagcggatttagctcgttgggtggaaaaattgagtgccgagaaactgatcgcggtg
gacaccgaaaccgacgggctggattatatgtccgctaagttggtcggcgtgtcttttgcg
ttagaaaatggcgaagcggcgtatttaccgttgcatttggattatctcggagcgccaaaa
acgctcgaaaaaagcaccgcacttggtgccctcaaacccattttagagaatccgaatatc
ggtaaagtcggacagaatctcaagtttgatatgaccattttcgcccgcaacggcattgcg
ttgcagggcattgaattcgacaccatgttgctttcttacaccttggacagcaccggtcga
cacaacatggacgacttagctaagcgttatctcgggcaccaaaccattggctttgaagac
attgccggcaaagggaaaaatcagctgacgttcaaccaaatcccgctagagcaagcaggc
gaatacgcggcggaagatgccgacgtgaccatgaaattgcaacaagtgttgtgggaaaaa
cttcagtcgcaacccagtttggtggaactctatcagtccatcgaattgccgttgcttggc
gtgttgtcgcgtatggagcgttgcggcgtactgattgattctgatgcactgttcctgcag
tccaacgaaattaccgaaagattggccgcacttgaaatgcaggcgcacgaactggcgggg
caaccgttcaatttggcgtccacgaaacagttgcaagacattctgttcgataaactcggc
ttgccggtgttgcaaaaaacgccgaaaggcgcaccgtccaccaatgaagaagtgttggag
gaactggcgtacagccacgaattgccgaaagtgttggtggaacatcgcggtttgagcaaa
ctgaaatccacttacaccgacaaattgccgcaaatggtgaactcgcaaaccgggcgcgtg
cacacctcttaccatcaagccgtaacggcaaccgggcggctttcttccagtgatccgaat
ttgcagaatattcctattcgtaacgaggaaggccgtcgcattcgccaagcctttattgcc
cgcgacggttataaaattattgccgcagactactcgcaaatcgagctgcgcattatggcg
catttgtccaacgataccggtttgattaatgcgttcgcgcaaggcaaagatattcaccgt
tccaccgcggcggaaattttcggtttgccgttggaacaggtgacgagcgaacaacgccgc
aacgcgaaagccattaactttgggctgatttatggtatgtcctctttcgggctttcccgt
cagcttgggatttcccgcgcggatgcgcaacgctacatggatttgtatttccaacgttac
ccgggcgtgcaaacctttatgcacgacattcgtgagaaggcgaaagcgcaaggctatgtg
gaaaccttgttcggacgccgtttgtatttgccggaaatcaattcttccaacgccatgcgt
cgtaaaggcgcagaacgggttgcgattaacgcgccaatgcaaggcaccgccgccgacatc
atcaaacgcgccatgattaaattggatgaaattacgcgtgataatccggatattcacatg
atcatgcaggtgcacgatgaattggtgtttgaagtgcggtcagaaaaaatcgcgtttttt
agcgagctcatcaaacaacatatggaagcggccgctgagcttgtggtgccgctgattgtg
gatgtcggcgtgggcgagaattgggacgaagcccactaa

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