Aggregatibacter sp. oral taxon 513: J5A60_01765
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Entry
J5A60_01765 CDS
T08731
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
agj
Aggregatibacter sp. oral taxon 513
Pathway
agj03030
DNA replication
agj03430
Mismatch repair
agj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J5A60_01765 (dnaE)
03430 Mismatch repair
J5A60_01765 (dnaE)
03440 Homologous recombination
J5A60_01765 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agj03032
]
J5A60_01765 (dnaE)
03400 DNA repair and recombination proteins [BR:
agj03400
]
J5A60_01765 (dnaE)
Enzymes [BR:
agj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J5A60_01765 (dnaE)
DNA replication proteins [BR:
agj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J5A60_01765 (dnaE)
DNA repair and recombination proteins [BR:
agj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J5A60_01765 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QUC06209
LinkDB
All DBs
Position
332112..335588
Genome browser
AA seq
1158 aa
AA seq
DB search
MSPPRFVHLQVHSDFSMIDGIAKVKPLVKACVENNMVAMALTDFTNFCGLVRFYGEALSS
GVKPIIGADVLVQSDLCGEERFRLTLLAKNNEGYKNITLLLSKAYERGYSDVPYIDQQWL
VEHRAGVIVLSGGVNGDVGKKLLRSNTDELKSAVDFYHEFFPDHFYLMLTRTGRPDEERY
IQAALELAEREQLPVVATNDVCFLQAEDFEAHEIRVAIHDGFTLDDPKRPKLYTHQQYFC
SEQEMCELFADVPSALENTLLIAQRCNVTIRLGEYFLPQFPTGDLSTEDYLVKRAKEGLE
ERLKVLFPDEKLRAERRPEYDERLQVELDVINQMGFPGYFLIVMEFIQWSKDNDIPVGPG
RGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEHVAEM
YGRGAVSQIITFGTMAAKAVIRDVGRVLGQPYGFVDRISKLVPPDPGMTLAKAFEAEPKL
QEIYDADEEVRAIIDMARKLEGVTRNAGKHAGGVVISPTLITDFSPLYCDSEGKHPVTHF
DKNDVEYAGLVKFDFLGLRTLTIIKWALDMINARMEKEGKPLVDINAIPLDDHQSFEVLL
NAETTAVFQLESRGMKDLIKRLKPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREEV
SYPDANYQHESLKPILEPTYGIILYQEQVMQIAQVLAGYTLGGADLLRRAMGKKKPEEMA
KQRSVFEEGAIKNGIDGDLSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAE
FMAAVMTSEMDNTDKIVGLYDECMRMGLKVVPPDINTGKHHFSVNENGEIVYGIGAIKGV
GEGPIAALVEAREKDGIFKNLFDLCARVDLKKINRRTFESLIKSGAFDKLGPHRAALQQN
LEDALRASDQHAKDEALGQTDMFGVLTETNEEVEHSYANIAPWTEKTILDGERETLGLYL
SSHPVSRYLKELSHYSPMRLKELTPNYRGQMSTASGLVVNTRIAMTKKGNHIGIATIDDR
SGRLDLTLFGEALDKFGEKLQKDTVIVVSGQVSFDDFSQGLRMSVRDLMTIDEARARYAK
SLAICLSQEQITPQFIKQFKRILQPYSGNSLPVHIYYQSPEGRALVKMGVQWSVNPTDEL
LTELVTLLGESAVELEFE
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccgccacgttttgttcatttacaggttcacagtgatttttccatgattgacggt
atcgccaaggtgaaaccgttggtgaaagcctgcgtggaaaacaacatggtggcgatggcg
ttgacggatttcaccaacttttgtggtttggtgcggttttatggtgaggcattgtcttcg
ggcgtgaaaccgattatcggtgccgatgtgctggtgcaaagcgatctgtgtggcgaggaa
agattccgtttaaccttattggcaaaaaataacgaaggctacaaaaatatcaccttgttg
ctttccaaagcctatgagcgcggttattcggatgtgccgtatattgatcagcagtggcta
gtagaacatcgtgccggggtgattgttttatccggcggcgtcaatggcgatgtaggtaaa
aaattactgcgtagcaatactgatgaactcaaaagtgcggtggatttttaccacgaattt
ttccctgaccatttttatctgatgcttactcgtaccggtcgtcccgatgaagaacgttac
atccaagccgcgttagaactggctgagcgggaacaattgccggtggtagcgaccaatgat
gtatgctttttacaggcagaagattttgaagcccatgaaattcgtgtagcgattcatgac
ggtttcacattggacgatccgaaacgtccaaaactttatacccatcaacaatatttttgc
tccgagcaagaaatgtgcgagctttttgccgacgtaccaagtgccttggagaataccctg
ttaattgctcagcgttgtaacgtgaccattcgattgggcgaatatttcttaccgcaattt
ccaaccggggatttaagcaccgaagattaccttgtgaaacgcgccaaagagggcttggaa
gaacgcctcaaggtgctgtttcctgatgaaaaactgcgtgcagagcgccgcccagaatat
gatgaacgcttgcaggtggaactggatgtaatcaaccaaatgggcttcccgggctacttt
ttgatcgtgatggaatttatccaatggtcaaaagataacgatattccggtggggccgggg
cgaggttccggtgcgggatctttggtggcttatgcgttaaaaattaccgatttggatccg
ttggaattcgatttgctttttgagcgtttcctcaatccggaacgggtttccatgcctgat
tttgacgtggatttctgtatggacgggcgcgaccgcgtgattgaacacgtcgctgaaatg
tatgggcgcggcgcggtatcgcaaattattaccttcggaaccatggcggcaaaagcggtg
attcgagatgttgggcgcgtactgggacaaccttatggctttgtggatcgcatttctaag
ttggtgccgccggatcccggtatgacgctcgcgaaagcgtttgaagccgagccaaaactg
caagaaatttacgatgccgatgaagaagtccgagccattattgacatggcacgcaagctg
gaaggcgttacgcgtaatgccggtaagcatgccggtggggtggtgatttcgccgacgtta
attacagatttctcgccgttgtattgtgattcggaagggaaacatccggtcactcacttc
gataaaaatgatgtggaatatgcgggtttagtgaagtttgacttcttaggcttacgtact
ttaaccatcataaaatgggcgttggacatgattaacgcgcgcatggaaaaagaaggcaaa
ccgttagtggatatcaatgccattccattggatgatcatcaatcttttgaagtgttgctc
aatgccgaaaccacggcagtgttccagttggaatcacgcggcatgaaagatttgattaag
cgtcttaagccagactgttttgaagatattatcgcgttggtagccttgttccgtcccggc
ccgttgcaatcgggtatggtggataactttatcgaccgtaaacacgggcgagaagaagtg
tcttacccggatgctaactatcaacatgaatcccttaagccgattttagaaccaacctac
ggcattattttgtatcaagagcaggtcatgcaaattgcccaagtgttggcgggttatacg
ttgggtggcgcggacttattgcgtcgtgcgatgggtaagaaaaaaccggaagaaatggcg
aagcagcgttccgtatttgaagagggggccatcaaaaatggcatcgacggggatctttcc
atgaaaatcttcgatttggtggaaaaatttgcgggttatggctttaacaaatcccactca
gctgcttatgctttggtgtcctatcagaccctgtggttgaaagcccattatccggcagag
ttcatggccgcagtaatgacttcggaaatggataacaccgacaaaatcgttggcttgtat
gacgaatgtatgcgcatgggcttgaaagtcgttccgcctgacattaacaccgggaaacat
cattttagcgtgaatgaaaacggcgaaattgtgtatggtatcggtgccattaaaggcgtg
ggtgaagggccgattgccgccttggtagaagctcgtgagaaagacggtattttcaaaaac
ttatttgatttatgtgcccgcgtggatttaaagaaaatcaatcgacgcacgtttgaaagc
ctgattaaatccggtgctttcgataaacttggaccacatcgtgcggcgttacaacaaaat
ctggaagatgcgctacgtgcctccgatcaacacgctaaagacgaggctttagggcagacg
gatatgttcggcgtgttgacagaaaccaacgaggaagtggaacattcttatgccaacatt
gcgccttggacggaaaaaacgattttagacggtgaacgggaaactctcggattgtatttg
agtagccatcctgtgagtcgttatttaaaagaattatcccattacagcccaatgcgtcta
aaagaattaacgccgaattatcgcggacaaatgagcaccgccagcggtttggtggttaat
acgcgcattgccatgaccaaaaaaggtaaccatatcggcattgccaccattgatgatcga
tccggtcgtttagatttaacgttgtttggcgaagcgctagataaattcggtgagaaactg
caaaaagacacagtgatcgtggtgtcagggcaggtcagttttgacgacttttcacaaggc
ttgcgtatgtctgtgcgggatttgatgacgattgatgaagcgcgtgcacgttatgcgaaa
agccttgcgatttgcctgtctcaagaacaaattacaccgcaattcattaagcaatttaaa
cggattttacagccttacagcggcaattccctgccggtacatatttattaccaaagccca
gaaggcagagccttagtcaaaatgggcgtgcaatggtcggtcaacccaaccgatgaattg
ctgaccgaacttgtgacattgctcggtgaaagtgcggtggaattggagtttgaatag
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