Aggregatibacter sp. oral taxon 513: J5A60_02455
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Entry
J5A60_02455 CDS
T08731
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
agj
Aggregatibacter sp. oral taxon 513
Pathway
agj00470
D-Amino acid metabolism
agj00550
Peptidoglycan biosynthesis
agj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
agj00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
J5A60_02455 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
J5A60_02455 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
agj01011
]
J5A60_02455 (murD)
Enzymes [BR:
agj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
J5A60_02455 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
agj01011
]
Precursor biosynthesis
Amino acid ligase
J5A60_02455 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_7
TrkA_N
Pyr_redox
Pyr_redox_2
NAD_binding_8
AlaDh_PNT_C
F420_oxidored
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
QUC06335
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Position
472028..473332
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AA seq
434 aa
AA seq
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MQYQDKKVTVIGLGKTGLSCVDFLRAKHADVRVIDTRNAPAGAEQLDKAIPLHTGGLNQQ
WLLESDLIVISPGLAVKTPEIQTALQAGVEVVGDIELFCREADKPIVAITGSNGKSTVTT
LVAEMAKAAGLSVGMGGNIGIPALSLLNQSHDIYVLELSSFQLETTYSLKTVAATVLNVT
EDHMNRYVDLQDYRHAKLKIYDNCQTAVVNGEDPLTLPTTQHPEKQVSFAEHHADYWLKN
ENQKTYLMARDEAILACDEMKLTGRHNYMNALAAIALAQAAGINLLGIQTALREFGGLEH
RFQVAYMAHGVRWINDSKATNVGSTVAALTGLQVAGKLYLLLGGDGKGADFSELATLINQ
PHIFCYCFGQDGKQLAALSSQSQLFDTMEQAIAAIRPQLQAGDMVLLSPACASLDQFPCF
EARGDEFTRLARLS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatcaagataaaaaagtcactgttatcggacttggcaaaacagggttatcctgt
gttgattttctgcgtgctaaacatgctgatgttcgtgtcattgatacgcgtaacgcaccg
gcaggggcagaacaacttgataaagccattcctctgcataccggcggtttaaaccagcaa
tggctcttagaaagtgatttgattgtgattagcccggggcttgcggtaaaaacgccagaa
attcagaccgcacttcaagccggtgtcgaagtcgtcggcgatattgagctgttctgtcga
gaagcggataaaccgattgtggccattaccggttctaatgggaaaagtactgtgaccaca
ttggttgcagaaatggcaaaagccgccggtttgagcgttggcatgggcggtaatatcggt
attcctgcgctttctctattaaatcaatcacatgatatttacgttttggagctttctagc
ttccagttagaaaccacctattcgctaaaaaccgtggcggcaacggtgttgaatgtcacc
gaagatcatatgaatcgttacgtggatttacaggattatcgccatgcgaaattaaaaatc
tacgacaattgccaaacggccgtggttaacggagaagacccgctcactctgccaaccact
caacacccggaaaaacaagtgagttttgcggaacatcatgcggattattggctgaaaaac
gaaaaccagaaaacctatttaatggcgcgtgatgaggcgattttagcttgtgatgaaatg
aaattaaccggtcgtcataattacatgaatgccttggctgcaattgccttagcacaagcc
gccggtattaatttgttgggaattcagaccgcacttcgcgagttcggtggcttggaacac
cgtttccaagtggcgtatatggcgcacggcgtgcgttggattaatgattcaaaagcaacc
aatgtcggtagtacggttgctgcattaaccggtttacaggtcgccgggaaactctattta
ttactcggtggtgatggcaaaggcgcagatttttctgaattggcgacattaattaatcaa
ccgcatattttttgttattgctttgggcaggatggtaaacagttagctgcactttcgtca
caaagtcaattattcgacaccatggagcaggccattgcagcaattcgtccgcagttacaa
gcgggggacatggtattgttatccccggcctgtgcaagcttggaccaattcccttgtttt
gaagcacgtggcgatgagttcacgcgtttggctcgtttaagttaa
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