Aggregatibacter sp. oral taxon 513: J5A60_03095
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Entry
J5A60_03095 CDS
T08731
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
agj
Aggregatibacter sp. oral taxon 513
Brite
KEGG Orthology (KO) [BR:
agj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
agj01002
]
J5A60_03095
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
agj01011
]
J5A60_03095
Peptidases and inhibitors [BR:
agj01002
]
Cysteine peptidases
Family C82
J5A60_03095
Peptidoglycan biosynthesis and degradation proteins [BR:
agj01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
J5A60_03095
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
Motif
Other DBs
NCBI-ProteinID:
QUC06451
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Position
624219..625670
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AA seq
483 aa
AA seq
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MNTRTFKVVTLAMISALYVGNVAAEELQQSDLTLATQQLELENKVEEARLAAEKKRLALE
AEKLFSERFGDISLQFKPLIAKIYVENHFSPIWTDNQAKQQFLHDYALAIAGGISKRSAN
ALNAIHEAAGKGELIEDVLLTDAFLDYLFYATNVAKSAQKWLYAGNSYKAGQLSDEQVSA
WLSAVKNNDNFTFVKNLSGENALFKQTSARVAHVIEAGVDQHNVVELHRLAINAQRLRIL
PAFQDGIFVNIPSYELNYYRDGQVVLSSRVIVGQSSRKTPVMSSRLSNVVVNPPWNAPTR
LINEDIIPKVRKDPSYIYRHGYTIIDGSGNTIDPYTIDWENMSAKRFPYRLRQAPSDNSA
LGNYKFNMPSSEAIYLHDTPKRNLFGNKNRALSSGCVRVEKSDQLATILLKEAGWTDERK
QNVLKSKKTTSAGIKSDNPVFLYYITAWVDKDQVHTLPDIYGYDKTPDLSYINWDILKHY
IQR
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaatactcgaacgtttaaagtagttactctcgcgatgataagcgcgctttatgtgggg
aatgtcgctgcagaagaattacagcaaagtgatttaactctcgccacacagcagttggag
ctcgaaaataaggtcgaggaagcgcgtttagcggcagagaaaaaacgcttggcgcttgag
gctgaaaaacttttctctgagcgttttggtgatatctctcttcaatttaaacctttaatt
gccaaaatttatgttgagaatcatttttctccaatttggacagataatcaggccaagcag
caatttttacacgattatgccttagctattgccgggggaatttcaaaacgctcagcaaat
gctttaaatgcgatccatgaagccgctggaaaaggcgagttaattgaagatgttctgtta
accgatgcatttttagattatttgttttatgccaccaatgtagcgaaatccgcacaaaaa
tggttatatgcaggcaatagctataaagccggtcagttaagtgatgagcaagtgtctgca
tggttaagtgcggtcaaaaataatgataattttacttttgtgaaaaatctttccggcgaa
aatgcgctctttaagcaaacatcggcgcgcgttgctcatgtgattgaagcgggtgttgat
cagcataatgtggttgaattgcatcgtttggcgattaatgctcaacgtttacgcatttta
ccggctttccaagatggtattttcgtgaatattccaagttacgaactcaattattatcgc
gatggacaagtggttttaagttcccgtgtgattgttgggcaatccagccgtaaaacacca
gtgatgtctagtcgtttgagtaatgtggtagtgaacccgccttggaatgcgccaacccgt
ttgattaacgaagacattattcccaaagtacgtaaagatccgagttatatttatcgccat
ggctatacgattattgatggtagtggcaatactatcgatccttatactatcgattgggaa
aatatgtcggcgaaaagattcccatatcgtttacgccaagctccaagtgataacagtgca
ttagggaactataaattcaacatgccgagttctgaggcgatttatttgcacgatacaccg
aaacgtaatttatttggcaataaaaaccgtgcgttaagttctggttgtgtccgtgtggaa
aaatccgatcagttggccactattctattgaaagaagcgggttggacagatgaaagaaaa
caaaatgtgctgaaaagtaaaaaaacaacctcagcgggtattaaatccgacaatccggtc
tttttatattatatcactgcatgggtggataaagatcaagttcacactttgccggatatt
tacggttatgacaaaacgcctgatttaagttatattaattgggatattttaaaacactat
attcaacgttaa
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