Aggregatibacter sp. oral taxon 513: J5A60_03280
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Entry
J5A60_03280 CDS
T08731
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
agj
Aggregatibacter sp. oral taxon 513
Brite
KEGG Orthology (KO) [BR:
agj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agj03032
]
J5A60_03280 (gyrA)
03400 DNA repair and recombination proteins [BR:
agj03400
]
J5A60_03280 (gyrA)
Enzymes [BR:
agj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
J5A60_03280 (gyrA)
DNA replication proteins [BR:
agj03032
]
Prokaryotic type
DNA Topoisomerases
J5A60_03280 (gyrA)
DNA repair and recombination proteins [BR:
agj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J5A60_03280 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
DUF5748
Motif
Other DBs
NCBI-ProteinID:
QUC06488
LinkDB
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Position
complement(663072..665729)
Genome browser
AA seq
885 aa
AA seq
DB search
MSDFVQDITPVSIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEGGNAYN
KPYRKSARIVGDVIGKYHPHGDSAVYDTLVRMAQPFSLRYMLVDGQGNFGSVDGDAPAAM
RYTEARMTKIAHELLADLDKETVNFVPNYDGSEQIPEVLPTKVPALLVNGSSGIAVGMAT
NIPPHNLGEVLDGCLAYIENNDITIDELMSHIPGPDFPTAALINGRKGIEEAYKTGRGKI
YVRARAEIETDEKGRETIIVNEIPYQVNKAKLIEKIAEFVKEKKIEGISGLRDESDKDGM
RIVIEIKRDAVGEVVLNNLYALTQMQVTFGINIVALDHGQPKLLNLKQLIEAFVLHRREV
VTRRTIFELRKARERTHILEGLAIALANVDPIIELIRQAPNPESAKRELLARPWQLGHVA
EMLAATGVDAARPEDLDEQYGIRDGLYYLTEVQAQAILDLRLQKLTNLGHDEILDEYKKL
LEAIGELLYILRSPERLMEVIREELEQIREQFNDPRRTEITAASGDINLEDLIAQEDVVV
TLSHEGYVKYQPISDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSSRGRLYW
LKVYQLPQASRGSRGRPIVNILPLNENERITAILPVTAYEEDKFVVMATAGGIVKKIALT
EFSRPRSSGIIALNLRDEDELIGVDITDGNNEIMLFSSQGRVVRFSESAVRAMGRLATGV
RGIKLALTNDLNDDESAVEIEDVSDDNTEETLDLNIDKVVSLVIPKNDGEILTATQNGYG
KRTKLEEYPTKSRNTKGVISIKVSERNGKVVAATQVVDTDQIMLITDAGTLVRTRVSEVS
IVGRNTQGVRLIRTSENEHVVSLERICDVDDEEGEQESAVENTEE
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatttcgtccaagatattacgccggtcagtattgaagaagagctgaaatcttca
tacctcgattacgccatgtccgttattgtaggacgtgccttgcctgatgtacgtgacggc
ttaaaaccggtacaccgccgcgtgttatttgctatgcacgaagggggcaatgcctacaat
aaaccttaccgtaaatctgcccgtattgtgggtgacgttatcggtaaataccacccacac
ggtgatagcgcggtatatgataccttggtgcgtatggcgcaacctttctccttgcgttat
atgttagtggacggtcaaggtaacttcggatctgtagatggcgatgcgccggcggcgatg
cgttatacggaagcccgtatgaccaaaatcgcccacgaattattggcagatctcgataaa
gaaaccgtcaattttgtgccaaactatgatggttcggaacaaattcctgaagtattacca
accaaagtcccagccttattggtcaacggttcttccggtattgcggtagggatggcgacc
aatattccaccacacaacctaggcgaagtattagacggttgcttggcttatatcgaaaat
aacgacatcaccattgatgaattgatgagtcatattcccggcccggatttcccaacagcc
gcattgattaatggtcgtaaaggtattgaagaagcctataagaccggtcgtggtaaaatt
tatgtccgtgcccgtgcggaaattgaaaccgatgaaaaaggccgtgaaaccatcatcgtt
aacgaaattccgtatcaagtcaataaagccaaattaatcgaaaaaattgcggaattcgtc
aaagagaaaaaaattgaaggcattagcggtttacgtgatgaatcagataaagacggtatg
cgtatcgtcattgaaatcaagcgcgatgccgtgggtgaagtggtattaaacaacttgtat
gccctcacgcaaatgcaggtcactttcgggattaatatcgtagcattagaccacggtcag
ccgaaactcttgaatttaaaacaactcattgaagcgtttgtgttacaccgccgcgaagtg
gtgacccgccgtaccatttttgaattacgcaaagcccgtgaacgcacccatattttggaa
ggtcttgctattgcgttagccaatgtggatccaattattgagctaattcgtcaagcacct
aatcctgaaagcgccaaacgtgaattacttgctcgtccatggcaacttggtcatgtggca
gaaatgttggcagcaacaggtgtagatgccgctcgcccagaagatttagacgagcaatat
ggcattcgtgacggtttatattatttaaccgaagtccaggcccaagccattttagattta
cgtttacaaaaattgaccaacttaggtcatgacgaaatcctagacgaatacaaaaaatta
ctggaagccatcggcgaattgctctatatcctacgcagtcccgaacgcttaatggaagtg
attcgtgaagagctggaacaaatccgagaacaatttaacgatccgcgaagaacagaaatt
accgccgcttccggtgacattaatttagaagatttaatcgcccaagaagatgtggtggtg
acactttctcacgaaggctatgtgaaatatcagccaattagcgattacgaagcacaacgc
cgcggtggcaaaggtaaatcggcaacgaaaatgaaagaagaagatttcattgagaaactc
ttagttgccaatactcatgacaccattctctgtttctccagccgtggacgcttatattgg
ttgaaagtataccaacttccgcaagccagccgaggatcacgcggacgaccaatcgtcaat
attttaccgctcaatgaaaatgaacgtattaccgccattttaccggtgaccgcttacgaa
gaagataaattcgtcgtcatggcaaccgccggcggtattgtgaagaaaattgcgttaacc
gaattcagccgtccacgttctagcggtatcattgcgctgaacttacgcgacgaagatgaa
ttgatcggtgtagatattaccgacggcaacaatgaaatcatgttgttctcttcccaaggt
cgcgtggtccgcttcagcgaatccgctgtgcgtgcaatggggcgtttggcgacaggggta
cgcggtatcaaactcgccttaaccaatgatctgaatgacgatgaaagtgcggttgaaatt
gaagatgtttctgacgataacacagaagaaaccttagatctcaatatcgataaagtcgtt
tctttagtcattccaaaaaacgatggcgaaatcctgactgcgacacaaaacggctacggc
aaacggacgaagttagaagaatatccgaccaagtcccgtaatactaaaggggtgatttca
attaaggtgagcgaacgtaatggcaaagtcgttgcggcaacacaagtggttgataccgac
caaatcatgttaatcaccgatgccggtaccttagttcgtacccgcgtaagcgaagtcagt
attgtcggacgtaacacgcaaggtgttcgtttaatccgcacaagtgaaaatgaacatgtt
gtgagcctagaacgcatctgcgatgttgatgacgaagaaggcgaacaagaaagtgcggta
gaaaataccgaagaataa
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