Aggregatibacter sp. oral taxon 513: J5A60_03570
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Entry
J5A60_03570 CDS
T08731
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
agj
Aggregatibacter sp. oral taxon 513
Pathway
agj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
agj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
J5A60_03570 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agj03019
]
J5A60_03570 (orn)
03009 Ribosome biogenesis [BR:
agj03009
]
J5A60_03570 (orn)
Messenger RNA biogenesis [BR:
agj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
J5A60_03570 (orn)
Ribosome biogenesis [BR:
agj03009
]
Eukaryotic type
Pre-60S particles
RNases
J5A60_03570 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Apo-CIII
Motif
Other DBs
NCBI-ProteinID:
QUC06533
LinkDB
All DBs
Position
complement(725299..725847)
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AA seq
182 aa
AA seq
DB search
MTLDKQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMSD
WCMKTHTANGLVERVKNSKLTERAAELQTLDFLKKYVPKGVSPICGNSVAQDKRFLFKYM
PELADYFHYRHLDVSTLKELAARWKPEILDGFSKQNTHLALDDIRESIKELAYYREHFLK
ID
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgacattagataaacaaaatctgatctggattgatcttgaaatgacaggcttagatccg
gaaaaagaacgcattattgaaattgcaaccattgtgaccgataaaaatttaaatattctt
gccgaaggccctgttctagccgtccatcaatctgacgaattactcaataaaatgagcgac
tggtgcatgaaaacccacacggcaaacgggctggttgaacgcgttaaaaacagcaaatta
accgaacgtgcggcagaattacaaaccttggattttctcaaaaaatacgttcccaaaggg
gtatcaccgatttgtggtaacagtgtggcacaagacaaacgctttctctttaaatatatg
ccggaacttgcagactactttcactatcgccaccttgatgtcagtacattaaaagaatta
gccgcccgctggaaaccggaaattctggacggctttagtaaacaaaacacccatttggca
ttagacgatattcgcgaatccatcaaagaactcgcttactatcgcgaacattttttaaag
atagactaa
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