Aggregatibacter sp. oral taxon 513: J5A60_04130
Help
Entry
J5A60_04130 CDS
T08731
Symbol
msbA
Name
(GenBank) lipid A ABC transporter ATP-binding protein/permease MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
agj
Aggregatibacter sp. oral taxon 513
Pathway
agj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
agj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
J5A60_04130 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agj02000
]
J5A60_04130 (msbA)
Enzymes [BR:
agj01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
J5A60_04130 (msbA)
Transporters [BR:
agj02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
J5A60_04130 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
DEAD
AAA_16
RsgA_GTPase
APS_kinase
nSTAND3
AAA_29
AAA_25
AAA_30
MMR_HSR1
ABC_ATPase
DUF5906
AAA
AAA_18
NB-ARC
Zeta_toxin
EMC3_TMCO1
Motif
Other DBs
NCBI-ProteinID:
QUC06631
LinkDB
All DBs
Position
complement(840368..842116)
Genome browser
AA seq
582 aa
AA seq
DB search
MQDQDLSTMQTFKRLWPMISPYKAGLIVSAVALILNALTDSGLIFLLKPLLDEGFGKADA
SFLKYMSVFVVLIIILRGVSSFISNYCLAWVSGKVVMTMRRRLFKHLMFMPVSFFDKNAA
GKLLSRITYDSEMIASASSGSLITIVREGAYLISLLCVMLYTSWQLSLVLFVIGPIIGIL
ISMVSKKFRNLSRNMQNSMGDLTSTAEQMLKGHKVVLSFGGQIIEEERFNHVSNDMRRKG
MKMTAADAIADPVVQIIASFALAAVLYLASFPSIMDQNLSAGTFTVVFSSMLALMRPLKS
LTNVNAQFQRGMAACQTLFGILDMETEKDTGTHKADKVKGDLEFKNVTFRYEGKEELALD
NISFHIPHGKTVALVGRSGSGKSTIANLVTRFYDVTQGEILLDGVNIQDYRLSDLRENCA
VVSQQVHLFNDTIANNIAYAAKDKYSREEIINAAKAAHAMEFIEHLEHGLDTVIGENGAS
LSGGQRQRLAIARALLRNSPVLILDEATSALDTESERAIQAALEEIQKDRTVLVIAHRLS
TIEKADEILVVENGQIKERGNHQALLAQGGAYKQLHGMQFSQ
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatcaagatctttctactatgcaaacctttaagcgtctgtggccaatgattagt
ccgtataaagccggtttgattgtttccgctgttgccttaattctcaacgccctaaccgac
tccggcttaattttcctactcaaacccttattggatgagggctttggtaaagcagacgca
tcatttttaaaatacatgtctgtctttgttgtgttaatcattatcttacgcggcgtgtcc
agctttatttccaactattgcttggcttgggtttccggtaaagtggtgatgaccatgcgt
cgccgtttattcaaacatttaatgtttatgccggtcagtttttttgataaaaacgctgcc
ggaaaactcctttcccgcatcacttatgactctgaaatgatcgccagcgcctcttccgga
tcattgattaccatagtgcgtgaaggcgcttatttaatttctcttctttgcgtcatgctt
tataccagctggcaactctctttggtgctttttgttatcgggccaatcatcggcattttg
atcagcatggtttctaaaaaattccgcaatttaagccgtaacatgcaaaactccatgggg
gatttaacctcaacggcagaacaaatgttaaaaggacataaagtggtactgtctttcggt
ggccaaattattgaagaagaacgtttcaatcacgtcagcaatgatatgcgccgtaaaggc
atgaaaatgacggcagcagatgccattgccgatcctgtggtgcaaatcattgcctcgttt
gcccttgctgccgtgttatacctcgcgagtttcccttccatcatggatcaaaacttaagt
gcggggacatttaccgttgttttctcttccatgcttgccttaatgcgcccgttaaaatcc
ttaactaacgttaacgcccaattccaacgcggtatggcagcctgtcaaaccttgttcggc
attttagacatggaaacggaaaaagacaccggtacgcataaagcagacaaggtaaaaggc
gatcttgaatttaaaaatgtcacctttcgctatgaaggaaaagaagaacttgccttggac
aatatttctttccacattcctcatggcaaaactgtggcattggtggggcgttccggttcc
ggtaaatctaccatcgctaatttagtgacccgtttctatgatgttactcaaggtgaaatt
ttgttagatggcgtgaatattcaagattatcgtctatcggatttacgcgaaaattgtgcc
gttgtctcccaacaagtgcacttattcaacgataccatcgccaataacatcgcttatgca
gcgaaagataaatatagccgtgaagaaatcattaacgcagcaaaagcggctcatgccatg
gaatttatcgaacatttagaacatggtttggataccgttatcggcgaaaatggcgccagc
ttatccggcggtcaacgccaacgtttagctattgctcgtgcgttattgcgtaattcaccg
gtgttaattttagatgaagcgacctccgctttagatacggaatccgagcgtgcgattcaa
gccgcattggaagaaattcaaaaagatcgtaccgttttggtgatcgcgcatcgtttatcc
accattgaaaaggctgacgaaattcttgtcgttgaaaacggacaaattaaagaacgcggc
aaccaccaagccctattggcacaaggcggtgcatataaacaattacacggcatgcagttc
agtcaataa
DBGET
integrated database retrieval system
