KEGG   Aggregatibacter sp. oral taxon 513: J5A60_05385
Entry
J5A60_05385       CDS       T08731                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
agj  Aggregatibacter sp. oral taxon 513
Pathway
agj00740  Riboflavin metabolism
agj01100  Metabolic pathways
agj01110  Biosynthesis of secondary metabolites
agj01240  Biosynthesis of cofactors
agj02024  Quorum sensing
Module
agj_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:agj00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    J5A60_05385 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    J5A60_05385 (ribD)
Enzymes [BR:agj01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     J5A60_05385 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     J5A60_05385 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam UCR_TM
Other DBs
NCBI-ProteinID: QUC05194
LinkDB
Position
complement(1124840..1125964)
AA seq 374 aa
MNKPFSPKDVAFMQLALDLAKQGEFTTTPNPSVGCVLVKDGKVVGKGFHAKAGEPHAEVM
ALRETGENARGATAYVTLEPCSHFGRTPPCAKGLVEAGVSKVIAAMCDPNPQVSGKGLQI
LSDAGIESAAGLLEEKAELLNKGFLKRMRTGKPFVQLKLAMSIDGKTAMASGESKWITGA
QARADVQQYRAKASAILSTSQTVLADDPSLNVRWEELPPNVKADYPQEKLRQPVRVILDS
SHKVRSDFKVFSTESPVWLVGEDGYPLAGFPVFTEYLQLDRNQGETRLQALMSALGKRQI
NTLWVEAGATLAGALIAENLVDELIIYMAPKLLGDQARDLCHLPNLTQLADAPLWQLQSC
EPVGDDLKLIYIRK
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgaacaaaccatttagcccaaaagatgttgcttttatgcaactggcgcttgatttagcc
aaacagggcgagttcaccacaacgccaaatccttccgtgggctgtgttttggtgaaagat
ggcaaggtggtcggcaaaggatttcatgcgaaagccggtgagccgcatgcggaagtgatg
gcattacgtgaaaccggtgaaaatgcccgtggtgcaacagcttatgtcaccttagagccc
tgttctcattttgggcgtacgccgccttgtgcgaaaggcttggttgaagccggcgtgagt
aaagtgattgcggcgatgtgcgatccgaacccacaagtgtcgggcaaagggttacagatt
ttaagcgatgcaggcattgaaagtgcggcgggattattggaagaaaaagccgaactgttg
aacaaaggctttttaaaacgcatgcgtaccggcaagcctttcgtgcagttaaaactggcc
atgagtattgatggcaaaaccgctatggcaagtggcgaaagcaaatggattaccggcgca
caggcaagggcggatgtacagcaatatcgcgccaaggcttctgcgatcttatcgacttca
caaaccgtgctggcggatgatccaagtttaaatgtacgttgggaagaattaccgcctaac
gtaaaagctgactatccacaagaaaaattacgccaaccggtgcgtgtcattttggattct
agccataaagtgcggtcggattttaaggtgttttcaacggaatcaccggtttggttggtc
ggcgaagatggttatccccttgcaggctttccggtctttaccgagtacttacaattagac
cgaaatcaaggtgaaactcgtttgcaagccttgatgtcggcattaggcaaacgccaaatt
aacaccctttgggtggaagcgggcgcgactttagcaggcgcattaattgctgaaaatttg
gtggatgaactgattatttacatggcgccaaaattgttaggcgatcaagccagagattta
tgccatttgcctaatttaacgcaacttgccgatgcgcctttatggcaactgcaatcttgc
gaacctgttggcgatgatctcaagttaatttatataagaaaatga

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