Aggregatibacter sp. oral taxon 513: J5A60_08680
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Entry
J5A60_08680 CDS
T08731
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
agj
Aggregatibacter sp. oral taxon 513
Brite
KEGG Orthology (KO) [BR:
agj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agj03021
]
J5A60_08680 (rpoH)
Transcription machinery [BR:
agj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J5A60_08680 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_25
UCR_14kD
DUF6890
Motif
Other DBs
NCBI-ProteinID:
QUC05791
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Position
1808580..1809428
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AA seq
282 aa
AA seq
DB search
MDKETQTMMLVPQGSLEAYIRAANEYPMLTAEEEKELAERLYYNEDIEAAKKLVLSHLRF
VIHVARGYSGYGLPQADLIQEGNIGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNENEVDMVANELGVSPQDVVEMESRMTGADV
AFDLPTDDHDEETYAPALYLEDKGSNFAAELENENYEAQATDQLAVALNNLDARSQDIIK
ARWLDETKATLQDLAEKYNISAERVRQLETNALKKLKSAVSF
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggataaagaaactcaaaccatgatgttagttccccaaggaagcttagaagcctatatt
cgcgcagcgaatgaatacccaatgttaacggcggaagaggaaaaggaactcgcggaacgt
ttgtattacaacgaagatattgaagcagcaaaaaaactcgtgttatctcacttgcgcttc
gttatccatgttgcccgtggttattccggttatggcttgccgcaagcggatttaattcaa
gaaggcaatatcggtttaatgaaagcagttaagcgttttaacccggaagtaggcgttcgc
ttagtgtctttcgccgtgcattggatcaaagcagaaattcacgaatacgttttgcgtaac
tggcgtattgtgaaagtcgcgacgaccaaagcgcaacgtaagttgttctttaatctacgc
aaaacaaaacaacgcttaggttggtttaatgaaaacgaagtggacatggtggcgaatgag
ttaggcgtttctcctcaagatgtggtggaaatggaatctcgcatgacaggggcggatgtt
gcctttgatttaccaacagacgatcatgatgaagaaacctatgcaccggcgttatacttg
gaagacaaaggctccaattttgctgccgagttagaaaacgaaaactatgaagcgcaagcc
acagatcaacttgcagtagcattaaataatcttgatgcacgtagccaagacatcatcaaa
gcccgttggttagatgaaaccaaagcgaccttgcaagacctggccgaaaaatacaacatc
tctgcggaacgtgttcgtcagctagagactaacgcactgaaaaaactaaaaagtgcggtc
agtttttaa
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