Aggregatibacter sp. oral taxon 513: J5A60_08730
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Entry
J5A60_08730 CDS
T08731
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
agj
Aggregatibacter sp. oral taxon 513
Pathway
agj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J5A60_08730 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agj03019
]
J5A60_08730 (recQ)
03400 DNA repair and recombination proteins [BR:
agj03400
]
J5A60_08730 (recQ)
Enzymes [BR:
agj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J5A60_08730 (recQ)
Messenger RNA biogenesis [BR:
agj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J5A60_08730 (recQ)
DNA repair and recombination proteins [BR:
agj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J5A60_08730 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Hanta_Gn-B
HEM4
Motif
Other DBs
NCBI-ProteinID:
QUC05797
LinkDB
All DBs
Position
complement(1817084..1818973)
Genome browser
AA seq
629 aa
AA seq
DB search
MNHLTPSESTKSAVDFLDKSSAKSTALYATAKNVLHSVFGYQAFRKGQEEIIQATLNGQD
CLVIMATGTGKSLCYQIPALCFDGMTLVVSPLISLMKDQVDQLRASGVEADYLNSSQTFE
EQQQVQNRAISGQLKLLYLSPEKVMTNSFFQFISLCQVSFIAIDEAHCISQWGHDFRPEY
TQLGGLKGSFPNVPIMALTATADPATQQDILQNLRLNRPHFHVGSFDRPNIRYTLVEKFK
PMEQLCRFVVAQKGKSGIVYCNSRNKVERIAETLCNKGVRAAAYHAGMENSLREKVQRDF
QRDNIQVVVATIAFGMGINKSNVRFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYDP
ADYVWLNKMLMEKPETPQRQIEQHKLQAIGEFAESQTCRRLVLLNYFGEHRQTACQNCDI
CLDPPKKYDGLLDAQKIMSAIYRTGQCYGAHYVIAVLRGMNNQKIRDQQHDQLSVYGIGK
EHSTEYWQSVLRQLIHLGFVRQIIGEYGNTLQLTENAKPILRGEMPLELATPRLSSIVTT
AMMHKSAVGSYDKDLFARLRFLRKQIADKENIPPYIVFNDATLQEMAQYQPVSNIEMLQI
NGVGTIKLERFGQAFLSLIREHKNARATE
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaccttaccccatccgaatctaccaaaagtgcggtggattttctcgataaatcg
tcggcaaaatccaccgcactttatgcgacggcaaagaatgtgttgcattcggtgttcggc
tatcaagctttccgcaaagggcaagaggaaattatccaggcgacgctgaatggtcaggat
tgcttggtcattatggcgacggggacgggaaaatccttgtgctaccaaattcctgcgttg
tgttttgacggtatgactttggtggtatcgccgttgatttcgctgatgaaagaccaagtg
gatcaactgcgtgctagcggcgtagaagcggattatttaaactcctcgcaaacctttgaa
gaacagcaacaggtgcaaaatagggcgatttccgggcagttaaaattattgtatttatcc
ccggaaaaagtcatgaccaacagctttttccaatttatttctttatgtcaggtgagcttt
atcgccattgatgaggcgcattgcatttcccaatgggggcacgattttcgccctgaatat
acccaacttggcggcttaaaaggcagtttcccgaatgtgccgattatggcgctgacagcc
acggcagaccccgcaacgcaacaagatattctgcaaaatctccgactaaatcgaccgcac
tttcatgtagggagttttgatcgcccgaatattcgttataccttggtggaaaaatttaag
ccgatggaacagctgtgtcgtttcgtggtggcacaaaaaggcaaaagcggcattgtgtat
tgcaacagtcgcaacaaagtggaacgcattgcggagaccctgtgcaacaaaggtgtgcgg
gcagcggcttatcatgcgggcatggaaaatagcttgcgggaaaaggtacaacgggatttt
cagcgggacaacattcaagtggtggtggcgacgatcgccttcggtatggggattaataaa
tccaacgtacgctttgtggcgcatttcgatttaccgcgtagcattgaatcctactatcaa
gaaaccggccgtgcagggcgggatgatttgccggctgaggcggtgttgttctacgatccg
gcggattatgtgtggttgaataaaatgttgatggaaaagccggaaacgccacaacgccaa
attgaacagcataaactgcaagccatcggtgaatttgccgagagccaaacctgtcgccgt
ttggtcttattgaattatttcggcgaacatcgtcaaaccgcctgtcaaaattgcgatatt
tgtcttgatccaccgaaaaaatacgatgggttgttggacgcgcaaaaaattatgtcggca
atttatcgcaccggtcaatgttatggtgcacattatgtcattgccgtcttgcgtggtatg
aataatcagaaaattcgcgatcagcaacacgaccaactgagtgtgtatggcatcggcaaa
gaacacagcacggaatattggcagtcagtattacgccagttaattcatttgggctttgtg
cgccaaatcatcggcgagtatggcaatacgttacagctcacagaaaacgccaagccgatt
ttgcggggagagatgccgttggaattggcaacgccacgcctgtcatctatcgtcactacg
gccatgatgcacaaaagtgcggtcggttcttacgacaaagatttatttgcacgtttgcgc
ttcttgcgtaagcaaattgccgataaagaaaacattcccccgtatatcgtgtttaacgat
gcgactttacaagaaatggcgcaataccaaccggtcagcaacattgagatgttgcaaatt
aacggtgtcggtacgattaaattggaacgtttcggacaagcgtttctgtctttaatccgc
gaacataaaaatgcccgcgcaaccgaataa
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