Actinobacillus genomosp. 2: NYR60_00565
Help
Entry
NYR60_00565 CDS
T09470
Name
(GenBank) YadA-like family protein
Organism
agk
Actinobacillus genomosp. 2
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFSR
Collagen
YadA_anchor
YadA_stalk
ESPR
YadA_head
Asp_decarbox
Motif
Other DBs
NCBI-ProteinID:
WGE32142
LinkDB
All DBs
Position
complement(119778..126152)
Genome browser
AA seq
2124 aa
AA seq
DB search
MNKIFKVIWNHGLQQFVVTSELSKSKGKASSTTDVRVEPTLSLSINKGLTLSALAIATAL
ISLTPGAKAATAVSGDSQVGLDIGGVRQWANLKTSLISNGQTVHLETIASSVALGVNAKS
ATQTDIVIGDAKTTSTKGYNVVLGNGAIAESNAVSANVIGNNAKATEYRANAIGTYAEAK
GRSSNAIGDQAKANVENSTAIGTGATANQVNSVVLGNGSNDRAATKESSSKTGNITYKDY
QGSNPTGVMSVGNSTAPRQLINVAAGKVSATSTDAINGSQLHAAQQVINNVATSVATSLG
GGSKVNTDGTVSAPSYTLTSNPSAAAKQTTNNIGAALSTLDTAVNQPLTFTGNSGSTTQK
LGSTLNISGTLATGGSSQNVRTQATNGKVEILFSETPTFNSVTINNPPTAGNQATTKNYV
DAGRTAVHAGSNTIVTSQQDPKTNKTTYTVHSLSTSPFEYATKDAKEPLVQINGKLYKKD
QVNPDGSLKPGATEYTGDVVIKPRGTATTKEELTNLLNGNVTNGSSDAITGDQLYNYVNV
NGKPATNKDGKVNFINGTNTEVKVTPNGEISYNVLTTTPTVTGGKFNPISGTDGNKFVTA
NDIVNTVNSLGWYVTTGKSGTGQNNGATNHLVKAGDTVKIIAGDNIKVDQADGSITISST
VKEGPKGEQGEKGDPGQNGTSITITKTEKTPDGTKVTFSDNSSIEIKDGEKGDPGVAGAK
GEKGDPGVAGAKGEKGDPGVAGAKGEKGDKGETGATGAKGEKGDKGETGATGAKGEKGDP
GVAGAKGEKGDKGETGATGAKGEKGDKGETGATGAKGDKGETGATGAKGDKGEDGKSATA
NVKDNGDGTHTVTINNPDGTSTTTTVKDGAKGDKGDKGEDGKSATANVKDNGDGTHTVTI
NNPDGTSTTTTVKDGAKGDKGDKGEDGKSATANVKDNGDGTHTVTINNPDGTSTTTTVKD
GAKGDKGDKGEDGKSATANVKDNGDGTHTVTINNPDGTSTTTTVKDGKDGKSATADVKDN
GDGTHTVTINNPDGTSTTTTVKDGAKGDKGDKGEDGKSATANVKDNGDGTHTVTINNPDG
TSTTTTVKDGAKGDKGDKGEDGKSATANVKDNGDGTHTVTINNPDGTSTTTTVKDGAKGD
KGDKGEDGKSATANVKDNGDGTHTVTINNPDGTSTTTTVKDGKDGKSATADVKDNGDGTH
TVTINNPDGTSTTTTVKDGAKGDKGDKGEDGKSATANVKDNGDGTHTVTINNPDGTSTTT
TVKDGKDGKSATADVKDNGDGTHTVTINNPDGTSTTTTVKDGAKGDKGDKGEDGKSATAD
VKDNGDGTHTVTINNPDGTSTTTTVKDGAKGDKGDKGDKGEDGKSATANVKDNGDGTHTV
TINNPDGTSTTTIVKDGKEGKSATADVKDNGDGTHTVTINNPDGTSTTTTVKDGAKGDKG
DKGEDGKSATANVKDNGDGTHTVTINNPDGTSTTTTVKDGAKGDKGDKGEDGKSATANVK
DNGDGTHTVTINNPDGTSTTTTVKDGKDGKSATADVKDNGDGTHTVTINNPDGTSTTTTV
KDGAKGDKGDKGEDGKSATANVKDNGDGTHTVTINNPDGTSTTTTVKDGAKGDKGDKGEN
GKSATADVKDNGDGTHTVTINNPDGTKSETVVKDGKDGKSATADVKDNGNGTHTVTITNP
DGTKISTVIKDGEKGKDGKDGKDGKSVTAEVVDNKDGTHTVTVTNPDGSKTRTTVKDGKD
GKAATAEVIDNNDGSHTIVITNPNGDKSESIVYNGKDGKDGKDGINGGKGGSGSWQLTVN
QDQTNSSVVNETDNTVDFGNNDGNLVVTKDGNNVKTDLNNTVNIAGKGKDGKVNIKDKDG
NDRITLDGQDGSIGITGKDGSTANITVKKGNTKTPNGNNPTRITYNDGNKNYEVATTEDG
LSFKGDNPKVTVKRRLGDTLTIKGGADSNKLTNNNIGVIANEDGSMSVKLAKDVDLGNDG
SVKIGDTSINNNGISIKNGPSVTKSGINAGNRTINNVAPGVKGTDAVNVNQLKQGLGNVH
NHVNNVDKKLRAGIAGAMASGGLYHATLPGKSMVAAGASNYRGESAVAVGYSRLSDNGKV
GVKFSLNTNTRGDTGAVGSIGYQW
NT seq
6375 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaatttttaaagtgatttggaatcacggcttacaacaatttgtagtaacctca
gagttatcaaaatcaaagggtaaggcatcgagtacaacagatgtccgtgttgagccgact
ttgagcttatctatcaataaagggctaacactatctgctcttgcaattgcgactgcactt
atttcattaactcctggtgcaaaagcagcaactgctgtatctggtgactctcaagtaggg
ttagatattggaggtgtaagacaatgggcaaacctaaaaactagccttatctctaatggt
caaactgtacatttagaaacaatagcaagtagcgttgctttaggtgtaaatgccaaaagt
gcaacccaaactgatattgtaatcggtgatgcaaaaacaacttctactaaaggttataac
gtagtattaggtaatggggctattgcggaaagtaacgctgttagtgcaaatgtgattggt
aataatgccaaagcaactgaatatcgtgcaaatgcgataggtacttatgcggaagcaaaa
ggtaggagttctaatgcaattggtgatcaagcaaaagctaatgtagaaaactcaactgct
atcggtacaggtgcaactgcaaatcaagttaacagcgttgtattaggtaacggctctaat
gatagagcggcaactaaagagtctagctcaaaaaccggtaatattacttataaggattac
caaggtagtaatcctactggtgtaatgagtgttggtaattcgactgctccacgccaatta
attaatgttgctgcaggtaaagtatcggcaacttcaaccgatgcgatcaacggttcacaa
cttcacgcagctcaacaagtcatcaataatgtggcaacatctgttgcaaccagtctaggt
ggcggttcaaaagtgaatacagacggtacggtttcagccccttcttatacattaacttca
aatccgtcagctgctgcgaaacaaaccaccaataatataggtgcggcattatcaacactt
gatacagccgtaaaccaaccattaacttttaccggtaattcaggttcaacaacacaaaaa
ttaggatcaaccttaaatatttcaggcacacttgcaacaggtggttcaagtcaaaatgta
agaacacaagcaacaaacggtaaagtagagatccttttctccgaaacacctacatttaat
agtgtaacaattaacaaccctccaacagcaggtaaccaagcaacaaccaaaaactatgtt
gatgcgggtagaacggcagttcatgcaggtagcaatactattgttacctcacaacaagat
cctaaaacaaataaaacaacctatactgtacattcattaagcacttcgccatttgaatat
gcaacgaaagatgctaaagagcctttagtccaaattaatggaaaattatataaaaaggat
caggttaatcctgatggttcattaaaaccaggagcaactgaatatactggtgacgttgtc
attaaacctcgtggtacagcaactactaaagaagaattaaccaacttacttaacgggaat
gtaactaatggttctagcgatgcaattaccggtgatcagttatacaattatgtcaatgta
aatggtaaacctgcaacaaataaagacggtaaagtcaactttattaatggtacaaatacc
gaggttaaagtaacccctaacggtgaaatttcttataacgtattaactactactccaacc
gttaccggtggtaaatttaatcctatttcaggtactgatggtaataaatttgttacggca
aatgatatcgttaatacagtaaatagcttaggttggtatgttacaacgggtaaaagtggt
acaggacaaaataatggtgcaactaatcacttagttaaagcaggcgatacagtaaaaatt
atcgcaggcgataatatcaaagtagatcaagccgatggttcaattactatttcttctaca
gttaaagaaggtccaaaaggcgaacaaggtgagaaaggtgatccgggtcaaaacggcaca
tcaattactatcactaaaactgaaaaaacaccggatggaacgaaagttacattctcagac
aatagctcaatcgaaattaaagatggtgagaaaggtgatccaggtgtagctggtgctaaa
ggtgaaaaaggtgatccgggcgtagctggtgctaaaggtgaaaaaggtgatccgggcgta
gctggtgctaaaggtgaaaaaggcgacaaaggtgaaaccggcgcaactggtgctaaaggt
gaaaaaggcgacaaaggtgaaaccggcgcaactggtgctaaaggtgaaaaaggtgatccg
ggcgtagctggtgctaaaggtgaaaaaggcgacaaaggtgaaactggcgcaactggtgct
aaaggtgaaaaaggcgacaaaggtgaaaccggcgcaacaggtgctaaaggcgataaaggc
gaaactggtgcaacaggtgccaaaggcgataaaggtgaagatggtaaatctgcaaccgct
aatgtgaaagataacggtgacggtacacacactgtaactatcaataatccagacggcacc
tctactacgactactgtgaaagatggtgcgaaaggtgacaaaggcgataaaggtgaagat
ggtaaatctgcaaccgctaatgtgaaagataacggtgacggtacacacactgtaactatc
aataaccctgatggtacatctaccacaactactgtgaaagatggtgcgaaaggtgacaaa
ggcgataaaggtgaagatggtaaatctgcaaccgctaatgtgaaagataacggtgacggt
acgcacactgtaactatcaataaccctgatggtacatctaccacaactactgtgaaagat
ggtgcgaaaggtgacaaaggcgataaaggtgaagatggtaaatctgcaaccgctaatgtg
aaagataacggtgacggtacgcacactgtaactatcaataatccagacggcacctctact
acgactaccgtgaaagacggtaaagatggtaagtctgcaacggctgatgtgaaagataac
ggtgacggtacacacactgtaactatcaataacccagacggcacctctactacgactact
gtgaaagatggtgcgaaaggtgacaaaggcgataaaggtgaagatggtaaatctgcaacc
gctaatgtgaaagataacggtgacggtacgcacactgtaactatcaataatccagacggc
acctctactacgactactgtgaaagatggtgcgaaaggtgacaaaggcgataaaggtgaa
gatggtaaatctgcaaccgctaatgtgaaagataacggtgacggtacacacactgtaact
atcaataaccctgatggtacatctaccacaactactgtgaaagatggtgcgaaaggtgac
aaaggcgataaaggtgaagatggtaaatctgcaaccgctaatgtgaaagataacggtgac
ggtacgcacactgtaactatcaataatccagacggcacctctactacgactaccgtgaaa
gacggtaaagatggtaagtctgcaacggctgatgtgaaagataacggtgacggtacacac
actgtaactatcaataacccagacggcacctctactacgactactgtgaaagatggtgcg
aaaggtgacaaaggcgataaaggtgaagatggtaaatctgcaaccgctaatgtgaaagat
aacggtgacggtacgcacactgtaactatcaataatccagacggcacctctactacgact
accgtgaaagacggtaaagatggtaagtctgcaacggctgatgtgaaagataacggtgac
ggtacacacactgtaactatcaataatccagacggcacctctactacgactactgtgaaa
gatggtgcgaaaggtgacaaaggcgataaaggtgaagatggtaaatctgcaaccgctgat
gtgaaagataatggtgacggtacgcacactgtaactatcaataaccctgatggtacatct
accacaactactgtgaaagatggtgcgaaaggtgacaaaggcgataaaggcgataaaggt
gaagatggtaaatctgcaaccgctaatgtgaaagataacggtgacggtacacacactgta
actatcaataatccagacggcacctctactacgactatcgtgaaagacggtaaagagggt
aagtctgcaacggctgatgtgaaagataacggtgacggtacgcacactgtaactatcaat
aatccagacggcacctctactacgactactgtgaaagatggtgcgaaaggtgacaaaggc
gataaaggtgaagatggtaaatctgcaaccgctaatgtgaaagataacggtgacggtaca
cacactgtaactatcaataaccctgatggtacatctaccacaactactgtgaaagatggt
gcgaaaggtgacaaaggcgataaaggtgaagatggtaaatctgcaaccgctaatgtgaaa
gataacggtgacggtacgcacactgtaactatcaataatccagacggcacctctactacg
actaccgtgaaagacggtaaagatggtaagtctgcaacggctgatgtgaaagataacggt
gacggtacacacactgtaactatcaataacccagacggcacctctactacgactactgtg
aaagatggtgcgaaaggtgacaaaggcgataaaggtgaagatggtaaatctgcaaccgct
aatgtgaaagataacggtgacggtacgcacactgtaactatcaataaccctgatggtaca
tctaccacaactactgtgaaagatggtgcgaaaggtgacaaaggcgataaaggtgaaaat
ggtaaatctgcaactgctgatgtgaaagataatggcgacggtactcacactgtaaccatc
aataatccagacggcaccaagtctgaaactgttgtaaaagatggcaaagacggcaagtct
gcaaccgctgatgtgaaagacaatggaaacggtacgcatactgtaacgatcacaaatcca
gatggaactaagatcagtacggttattaaagatggtgaaaaaggaaaagacggtaaagac
ggcaaagatggaaaatctgtaacagctgaggttgtcgacaataaagacggtactcatact
gtaaccgtcactaacccggatggctcaaaaactaggacgaccgtgaaagacggtaaagat
ggtaaagctgcaactgctgaagttattgataataatgatggatcacacacaattgtaatt
actaaccctaacggcgataaatctgaaagtatcgtatataacggtaaagacggcaaagat
ggtaaggacggtattaacggaggcaaaggaggttcaggtagctggcaattaactgtaaat
caggatcaaaccaatagttctgttgtaaatgaaactgataatacggttgactttggtaat
aacgacggcaacttagttgtgactaaagacggtaacaatgttaaaactgatctgaataat
actgtaaatatcgcaggtaaagggaaagacggtaaggttaacatcaaagataaagatggt
aacgatcgtattacactagatggtcaagacggttctatcggtattaccggtaaagacgga
tcgacagcgaatattacggttaagaaaggtaatactaaaacacctaacggtaataacccg
actcgcataacttataacgacggcaacaaaaactatgaagttgcaaccactgaagacggc
ttatcattcaaaggagataacccgaaagtaactgttaaacgtagacttggcgatacactt
actattaaaggtggtgcagatagcaacaagttaaccaataacaatatcggtgtaatcgca
aatgaagacggctcaatgtctgttaaattagcgaaggacgttgatttaggaaacgacggt
agcgtgaaaattggtgatacaagcattaataacaatggtatctcaattaagaacggacca
agtgtaactaaatcgggtattaacgcaggtaatcgtacgatcaataatgttgctccgggc
gtgaaaggtactgacgcagtaaacgtaaatcaattaaaacaaggtcttggcaatgttcat
aaccatgtaaacaatgttgataagaaactacgtgcaggtattgctggtgcaatggcttcg
ggcggtttataccacgcaactttaccgggtaaatcaatggttgctgcaggtgcttctaat
tacagaggtgaaagtgcagtagcagtaggttactcacgtttatctgataatggtaaagtc
ggtgtgaaattctctcttaatacaaatacgagaggcgatactggtgctgtgggtagcatt
ggctatcaatggtaa
DBGET
integrated database retrieval system