Actinobacillus genomosp. 2: NYR60_01200
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Entry
NYR60_01200 CDS
T09470
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
agk
Actinobacillus genomosp. 2
Pathway
agk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NYR60_01200 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agk03019
]
NYR60_01200 (recQ)
03400 DNA repair and recombination proteins [BR:
agk03400
]
NYR60_01200 (recQ)
Enzymes [BR:
agk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NYR60_01200 (recQ)
Messenger RNA biogenesis [BR:
agk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NYR60_01200 (recQ)
DNA repair and recombination proteins [BR:
agk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NYR60_01200 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
HEM4
ResIII
Helicase_Sgs1
Hanta_Gn-B
Motif
Other DBs
NCBI-ProteinID:
WGE32262
LinkDB
All DBs
Position
244509..246317
Genome browser
AA seq
602 aa
AA seq
DB search
MQLSQPAAKDVLNNVFGYQSFRHGQQEVIDSVLAGKDCLVIMTTGGGKSLCYQVPALCLD
GITLVISPLISLMKDQVDQLLTNGIEAGFLNSSQTFEEQQQVEQKALSGQLKLLYLSPEK
VMTQGFFHFISLCKISLIAVDEAHCVSQWGHDFRPEYTLLGNLRDTFPNVPLMALTATAD
PTTRHDILQHLRLKAPHTYLGSFDRPNIRYTVQEKFKPMEQLAKFISKQQGKSGIVYCNS
RKKVEEITEKLAARKISVMGYHAGMSVQQRETVQNAFQRDNIQVVVATIAFGMGINKSNV
RFVVHFDLPRSIESYYQETGRAGRDDLPSEAVLFYDPADYAWLQKVLLEEPESEQRDIKQ
HKLQAIGAFAESQTCRRLVLLNYFGESRQEPCKNCDICLDPPRKYDGTLDAQKVMSVIYR
TGQTFGAHHVIGVLRGLNNQKIRQFNHDQLSVYGIGKEQSQDYWLSIIRQLIHLGLIRQN
IVNHSALQLTEEARPVLRSEKKLELAMPRLTFSATAYVQKQTSVRYDKDLFARLRFLRKQ
IADKENIPPYVVFNDATLQEMAEFLPLSEVEMLDINGVGERKLERFGGAFLSLIREHCNN
RQ
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgcaattatctcaacctgccgccaaagatgtgttaaataatgtcttcggttatcaatct
tttcgtcatggacagcaagaagtgattgattcggtattagcaggaaaagattgtcttgtg
attatgactaccggtggtggtaagtcgctttgttatcaagtgccggcactttgcttagat
ggcattacgctagtgatttctccactcatttctttgatgaaagatcaggtcgatcagcta
ctaactaatggtatcgaagccggctttttaaattccagccaaacgttcgaagaacagcaa
caagttgaacagaaagcgctttccggtcagctgaaattactttatctctcaccggaaaag
gtgatgactcaaggattttttcactttatttcgctatgcaaaattagtttgattgcggtg
gatgaagcccattgtgtttcgcagtggggacatgattttcgtccggaatatactttatta
ggcaatttgcgtgatacctttccgaatgtgccgttgatggcattaacggcaactgcagat
ccaacgactcgtcacgatattctacagcacctccgcttaaaagcaccgcatacttattta
ggcagttttgatcgcccgaatattcgctatacagtgcaagaaaaatttaagccgatggag
caattagcaaaatttatcagtaagcaacagggcaagagcggtatcgtttattgcaacagc
cgtaaaaaagttgaagaaattactgaaaaactggcagcgcgtaagatttcagtaatgggc
tatcacgccggaatgtcggttcagcagcgagaaacggttcagaatgcgtttcagcgagat
aatattcaggtcgtagtggcaacgattgcttttggaatggggattaataaatcgaacgtg
cgttttgtcgtgcatttcgatttgccgcgcagtatcgaatcttactatcaagaaaccggg
cgtgcaggacgtgatgatttaccctccgaagcggtgttattttatgatcctgccgattat
gcgtggctacaaaaggtgttactggaagaaccggaaagtgaacagcgagatataaaacaa
cataaattacaggcgattggcgcttttgccgaatcacaaacttgtcgccgtttagtattg
ctgaattactttggtgaatcacgccaagagccgtgtaaaaattgtgatatttgtttagat
ccaccccgtaaatatgatgggacattggatgcgcaaaaagtaatgtcggtgatttatcgt
accggtcaaacttttggtgcacatcatgtgattggtgtattgcgtggtttgaataatcag
aaaattcgtcagtttaatcatgatcagctttcggtgtacggcatcggcaaagagcagagc
caagattattggctaagtattattcgtcaactgattcatcttggtctaattcgtcaaaat
attgttaatcattcagctctacagttaactgaagaagctcgtccggtattgcgttcggag
aaaaagctcgaattagcaatgcctcgtttaacgttttcagcaacggcttatgtacagaaa
caaacttcggttcgttatgataaagacttatttgctcgtttgcgttttctacgtaagcaa
attgccgataaagagaatatcccaccttatgtggtattcaatgatgcgactttgcaagaa
atggcggaatttttaccgcttagcgaggtggaaatgttggatattaacggagtgggggag
cgtaaattagaacgtttcggtggtgcatttttaagtttgattcgagaacattgtaacaat
cgccaataa
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