Actinobacillus genomosp. 2: NYR60_02565
Help
Entry
NYR60_02565 CDS
T09470
Symbol
ycaO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
agk
Actinobacillus genomosp. 2
Brite
KEGG Orthology (KO) [BR:
agk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
agk03009
]
NYR60_02565 (ycaO)
Ribosome biogenesis [BR:
agk03009
]
Prokaryotic type
ribosomal protein modification factors
NYR60_02565 (ycaO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
WGE32514
LinkDB
All DBs
Position
complement(533122..534885)
Genome browser
AA seq
587 aa
AA seq
DB search
MSEQTFITGKDAALEDSISTFQHKLKTLGFNIEEASWLNPVPNVWSVHIRDADCPQCFSN
GKGASKKAALASALGEYFERLSTNYFWADFYLGQEIANSKFVHYPSEKWFPIEDDVLPPA
DMMDDYLWEYFDPNGELTPELLVDLQSGNYDRGIVTLPYVRQSDNQTVYIPQSIIGNLFV
SNGMSAGNTKNEARVQGLSEVFERFVKNRIITEAISLPEIPQSVIDGYPTIKASIEKLEQ
EGFPILCYDASLGGEFPVICVILLNPNNGTCFASFGAHPNFQVAFERTVTELLQGRSLKD
LDVFAPPSFNNEDVADHANLETHFIDSSGLISWDLFKKDADYDFVHWDFSGTTEQEFANM
MAIFNKHEQPVYIMDYEHLGVYACRILAPGMSNIYPSDDLIYANNNMGMDWREILLDLPH
FHHDRETYQELLDELDEQGIDDLTRVREFIGLVAEKGSAMQTLRIGELKSMLHLALGNLE
QALDWANWTANMNASVFSAERNNYYRCLIQSIELFLDKERDAEQYRMVFEKMYGKQAVEF
AWNAVNGGNPFHGLTASDESLENMTAHQKLLDAYRKLQVAKVNPIAR
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacaaacttttattaccggtaaagatgctgcacttgaggacagcatttctacc
tttcaacataaattaaaaactttaggctttaacattgaagaagcatcttggttaaacccg
gtgccgaatgtgtggtcggtacatattcgcgatgcagattgcccacaatgtttctcaaat
ggtaaaggtgcaagcaaaaaagcagctttagcttcggcattaggcgagtattttgagcgt
ttatccaccaattacttttgggcagatttttatttaggtcaagaaatcgccaatagtaaa
ttcgttcattatccgagtgagaaatggttcccaatcgaagatgacgtattaccgccagcg
gatatgatggacgattatttatgggaatatttcgatccgaatggtgagcttacgccggaa
ttattagttgatcttcaatccggaaattacgatcgtgggattgtaaccttaccttatgta
cgccaatcggataaccaaaccgtgtatattccgcaaagcattatcggtaacttatttgtt
tcaaacggtatgtcggcaggtaatacaaaaaacgaagcacgtgtacagggtttgtcggaa
gtattcgaacgttttgtgaaaaaccgtattatcactgaagcaatcagcttgccagaaatt
ccacaaagcgtgattgacggttatccgacaatcaaagcatctatcgaaaaactcgaacaa
gaaggcttcccgattttatgctatgacgcatcattaggcggtgaattcccggttatttgt
gtgattttgttaaatccgaataacgggacttgtttcgcttcattcggtgcacacccgaat
ttccaagtcgcattcgagcgtacagtaaccgagttattacaaggtcgtagcttaaaagat
ttagatgtgtttgctccgccttcatttaataatgaagatgtggcggatcacgctaacctt
gaaacgcactttattgattcaagcggtctaatttcttgggatcttttcaagaaagatgca
gattatgacttcgttcattgggatttctcaggtacaaccgagcaagaatttgccaatatg
atggcaatctttaataagcacgagcaaccggtttatattatggattatgagcatttaggc
gtgtacgcttgtcgtattcttgcaccgggtatgtcgaatatctacccaagtgatgattta
atttatgcaaataacaatatgggtatggattggcgtgaaatcttgttagatctgcctcat
ttccatcacgatcgtgaaacttatcaagaacttcttgatgaattagatgaacaaggtatt
gatgatttaactcgtgtgcgagagtttatcggtttagtggcggaaaaaggttctgcaatg
caaaccttacgtatcggtgagcttaaatcgatgctgcatttagcgttaggcaacttagag
caagcgttagactgggcaaactggacagcaaatatgaatgcgagcgtattctcagcggaa
cgtaataattattatcgctgcttaattcaatcgattgaattattcttagacaaagaacgt
gatgcggaacaataccgtatggtatttgaaaaaatgtacggcaagcaagcggttgaattt
gcttggaatgccgtaaacggaggcaatccgttccacggtttaactgcatcggacgaatcc
ctcgaaaatatgactgcacatcagaaattactggatgcgtaccgtaaattacaggtagcg
aaagtaaatccgattgctcgttaa
DBGET
integrated database retrieval system
