Actinobacillus genomosp. 2: NYR60_05805
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Entry
NYR60_05805 CDS
T09470
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
agk
Actinobacillus genomosp. 2
Pathway
agk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
agk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NYR60_05805 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agk03400
]
NYR60_05805 (mutM)
Enzymes [BR:
agk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NYR60_05805 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NYR60_05805 (mutM)
DNA repair and recombination proteins [BR:
agk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NYR60_05805 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
Zn_ribbon_ACC
NFACT_N
RNHCP
Motif
Other DBs
NCBI-ProteinID:
WGE31389
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All DBs
Position
1187358..1188179
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AA seq
273 aa
AA seq
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MPELPEVETSLRGVEPYLHGKTIKQIIVRTNKLRWAISDELQQMQGEKIISLSRRAKYLI
LHTTNGDILIHLGMSGSLGILQESQQAAGKHDHVDLITRDGTVLRYNDPRKFGCWLWMHN
AEQHELITRLGPEPLSEAFTAEYLFTRSRNKTVAVKNFIMNNDIVVGVGNIYACESLFMA
GIHPELATQNLTKQQCERLVKVIKDVLTKAIIQGGTTLKDFIQPDGKPGYFAQVLQVYGR
KGEACNDCGTMIEAKVIGQRNSYFCPHCQKLPL
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattaccagaagtggaaaccagcttacgaggtgtagaaccttatctacacggc
aaaaccattaaacagattatcgtacgaactaataaattacgttgggcaatttcagatgaa
ttacaacaaatgcaaggcgaaaaaatcatttcgctctctcgccgtgccaaatatttaatc
ttacatacgacaaacggcgatattctgattcacctaggaatgtccggttcactcggtatt
ttacaagaaagtcaacaagctgccggcaaacacgatcatgttgatcttattacccgagat
ggtactgtgcttcgttataacgacccacgtaaattcggttgttggctatggatgcacaat
gcggaacaacacgagctgattactcgtttaggaccggaaccgctctctgaagcatttaca
gccgagtatttatttactcgaagccgtaacaaaaccgtggcagtcaaaaactttattatg
aataacgatattgtggtgggtgtggggaatatctatgcttgcgaatctctgtttatggct
gggattcatccggaacttgcaacgcaaaacctgactaagcaacaatgcgaacgcttagtt
aaagtgattaaagatgtattaactaaagcgattattcagggtggaacaacgcttaaagat
tttattcaacctgatggaaaaccgggttattttgctcaagtattacaagtttacggtcgc
aaaggcgaagcctgtaatgactgtggaacaatgattgaagcaaaagtgatcgggcaacgt
aatagttatttctgccctcattgccaaaaactgcctctctag
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