Akkermansia glycaniphila: PYTT_0015
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Entry
PYTT_0015 CDS
T04551
Name
(GenBank) pyridoxal phosphate-dependent transferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
agl
Akkermansia glycaniphila
Pathway
agl00260
Glycine, serine and threonine metabolism
agl00460
Cyanoamino acid metabolism
agl00630
Glyoxylate and dicarboxylate metabolism
agl00670
One carbon pool by folate
agl00680
Methane metabolism
agl01100
Metabolic pathways
agl01110
Biosynthesis of secondary metabolites
agl01120
Microbial metabolism in diverse environments
agl01200
Carbon metabolism
agl01230
Biosynthesis of amino acids
agl01240
Biosynthesis of cofactors
agl04981
Folate transport and metabolism
Module
agl_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
agl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PYTT_0015
09102 Energy metabolism
00680 Methane metabolism
PYTT_0015
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PYTT_0015
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PYTT_0015
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PYTT_0015
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PYTT_0015
Enzymes [BR:
agl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PYTT_0015
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Gene cluster
GFIT
Motif
Pfam:
SHMT
LacAB_rpiB
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
DUF3040
DUF4456
Motif
Other DBs
NCBI-ProteinID:
SEH69178
UniProt:
A0A1H6K9L8
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All DBs
Position
I:complement(24520..26259)
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AA seq
579 aa
AA seq
DB search
MSAVVSCIVGGHSVHAHTMNQKLRISVGSDHAGVDLKEVIVDQLQEWGYEVDDVGTYSKS
SCDYSDYANAVSRKVVDGVSDRGILICRSGIGMSIAANRWVGIRAALCRTAVPAILSRNH
NNSNVLCLAAGFVNSDDVPEILESWLEAEYEGGRHEQRLLKGAGSALAVSDPDLAKLIQE
EQDRQNNNIELIASENFASRAVREAQGSVLTNKYAEGYPGKRWYGGCEVVDQVEQLAIDR
AKVLFGGDHVNVQPHSGSQANMAVYFSVLKPGDTILTMDLSHGGHLTHGHFANFSGKLYN
VVHYGVSQETETIDYDALEKMAMEVKPQMITAGASAYSRTIDFERMGKIAKACGAYLFVD
MAHIAGLVAAGVHPSPIPHADFVSTTTHKSLRGPRGGMVFCKEEFAKKLDATVFPGTQGG
PLMHVIAAKAACFGEALKPSFKEYQTQVVRNSAAMAKKLADLGFRIVSGGSDNHVFMVDL
RNKGINGAEAQVALDKVGITVNKNSIPFDTGSPMKPSGIRIGTPAVTTRGMKEEDVEQVA
EFISRTLAIFVAQQIHSDPSAYDALREEVTAFNRAFPMP
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggtggtgtcctgtatagtgggcgggcattcagtgcatgctcacaccatgaac
cagaaattacgtatctctgtaggctccgatcacgccggggtggatttgaaggaagtcatc
gtcgatcagcttcaggaatggggctatgaggtggatgatgtcggtacctacagcaaatcg
tcctgcgattattccgattatgcaaatgccgtttcccgcaaggtggtggacggtgtgagc
gatcgcggcattctgatctgccgctcgggtatcggtatgagcattgccgccaaccgctgg
gtcggcatccgtgccgctctctgccgcacggctgttccggctattctttcccgcaatcac
aacaattccaatgtgctttgccttgctgccgggttcgtgaattccgacgatgtgcctgaa
attctcgaatcctggctcgaagccgagtatgaaggcggccgccatgagcagcgtttgctg
aagggcgcaggcagcgctctcgccgtgagcgatcccgatctcgccaagctgattcaggaa
gagcaggatcgccagaataacaatatcgagctgatcgcttccgagaattttgcatcccgt
gccgtgcgcgaagcccaaggttcggtgctgacgaacaagtatgcggaaggttatcccggc
aagcgctggtacggcggttgcgaagtcgtggaccaggtggaacagcttgcgatcgaccgt
gcgaaggtgctgttcggcggcgatcacgtgaatgtgcagccgcattccggctctcaggcc
aatatggccgtttacttctcggtgctgaagcccggcgatacgattctgacgatggatctt
tcccatggcggccatttgacgcacggccatttcgccaatttctccggcaagctgtacaat
gtggttcattacggcgtgtcgcaggaaacggagacgatcgattacgacgctctggaaaag
atggcgatggaagtgaagccccagatgattacggccggtgcgagcgcctactcccgtacg
atcgatttcgagcgcatgggcaagatcgccaaggcttgcggcgcgtatcttttcgtggac
atggcccatatcgccgggcttgtggcggcgggcgtgcatccgtcccccattcctcatgcc
gatttcgtttcgacgacgacgcacaaatccctgcgcggcccgcgcggcggcatggtgttc
tgcaaggaagagtttgcgaagaagctcgacgccaccgtgttcccgggtacgcagggcggt
ccgctgatgcatgtgatcgctgcgaaggcggcttgcttcggcgaagcgttgaaaccttcg
ttcaaggaataccagacgcaggtggtgcgcaattcggcggccatggcgaagaagctcgcc
gatctcggtttccgtatcgtttccggcggttcggacaatcacgtgttcatggtggacctt
cgcaacaagggtatcaacggtgcggaagcacaggtggctctggacaaggtgggtatcacg
gtgaataagaattcgattccctttgacacgggttctccgatgaagccgtcgggcatccgc
atcgggacgcctgccgtgacgacccgcggcatgaaggaagaagatgtggagcaggtagcg
gagttcatctcccgcacgctggcgatttttgtcgcccagcagattcattccgacccttcg
gcctacgacgcgctgcgtgaagaagtgacggcgttcaaccgcgccttcccgatgccgtaa
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