Akkermansia glycaniphila: PYTT_0957
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Entry
PYTT_0957 CDS
T04551
Name
(GenBank) p-loop containing nucleoside triphosphate hydrolase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
agl
Akkermansia glycaniphila
Pathway
agl03420
Nucleotide excision repair
agl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
agl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PYTT_0957
03430 Mismatch repair
PYTT_0957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agl03400
]
PYTT_0957
Enzymes [BR:
agl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PYTT_0957
DNA repair and recombination proteins [BR:
agl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PYTT_0957
MMR (mismatch excision repair)
Other MMR factors
PYTT_0957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
ResIII
AAA_12
Viral_helicase1
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
SEH81645
UniProt:
A0A1C7PD04
LinkDB
All DBs
Position
I:complement(1133324..1135315)
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AA seq
663 aa
AA seq
DB search
MARAYTIHGMQQPAPGRDYQGELNAEQFAAVTTDARHALVIAGAGSGKTRTLTYRVAWLL
EHGVAPWRILLLTFTNKAAKEMLTRVRDLVPQDTSAIWGGTFHSIANRILRRHAELAGFT
SSFTILDSDDRKSMLKALIKAKADTSKAARFPKAEVLSGLFSLAANRGEKWEDVLLSEYP
YLQHHRETIGVIYDAFAARKRESNAMDFDDLLVMAVDLLRRHEEVRERYRSQFLHVLVDE
YQDTNALQGEMIDLLGGGEETSLMVVGDDAQSIYSWRGADVQHIFDFEKEFPDTAVFKIE
TNYRSVPSILELSNAAIAANKRQFAKVLRPARAAGEMVPALVPLPDSRVEGLFVAQRIAE
LVDSGVSPSDIAVLYRAHFHCLDVQMALTRAGIPFRVTSGVRFFEQAHVKDVMAFLRVLV
NPLDEVAFLRVVRMFPKVGEVMARKLWMLWLAELPEDVSAVDGFAQRWGVCKVAAGVKGA
WEEFLELMDSLRPEEVSLAPGEMLKRIMEYYEPFMQAEFDNYEDRWLDLEQLCDAADAFG
GLDEFLAQTALLSNTDEDEKGEARAEVTLSTIHQAKGLEWKVVFLISLCDGMFPHQRVID
EGDPDGMEEELRLFYVAVTRAEDQLYMSYPRVNSRSYGSGGFYQYPSRFLSYCPSDLMEQ
WEV
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgagcgtatacgattcacgggatgcagcagcccgcgcccggaagggattatcag
ggggagctgaatgccgagcagttcgcggcagtgacgaccgatgcccggcatgcactggtg
attgcgggcgctggttccggcaagactcggacgctgacgtaccgcgtggcctggctgctg
gagcatggtgtggctccgtggcggattttgctgctgacgtttacgaataaggcggctaag
gagatgctgacgcgcgtgcgcgatctggtgccgcaggatacgagcgcgatttggggaggg
acgttccattcgatcgccaaccggattttgcgccgccatgcagagcttgccgggtttaca
tcgtcgtttacgattctcgattcggatgaccggaagtcgatgctgaaggcgctgatcaag
gcgaaggcggatacgagcaaggcggcgcgttttccgaaggctgaggtgctttccggtctg
ttcagcctggcggcgaaccgtggggagaagtgggaggatgtgctgttgtccgagtatccc
tatttgcagcaccaccgcgagacgatcggggtgatttacgatgcgtttgcggcgcggaag
cgggagagcaatgcgatggattttgacgatttgctggtgatggccgtggatttgctgcgc
aggcatgaggaggtgcgcgagcgttatcgcagccagtttctgcatgtgctggtggacgag
tatcaagatacgaatgctttgcagggcgagatgatcgatttgctggggggaggtgaggag
acgtcgctgatggtggtgggcgacgatgcgcagagtatttattcgtggcgtggggcggat
gtgcagcatattttcgatttcgagaaggagtttccggatacggcggtgttcaagatcgag
acgaattatcgcagtgtgccatcgattctggagttgtcgaatgcggcgattgcggccaat
aagcggcagtttgccaaggtgctgcggcccgcccgcgcggcgggcgagatggtgccggct
ctggtgccgctgccggattcgcgggtggaggggctttttgtggcgcagaggattgcggag
ctggtcgattccggggtgtctccttcggatatcgcggtgctgtaccgcgcgcatttccac
tgccttgatgtgcagatggctttgacccgggcggggattcccttccgggtgacgagtggg
gtgcgttttttcgagcaggcgcatgtgaaggatgtgatggcttttctccgggtgctggtg
aatcctctggacgaggtggcttttctgcgcgtggtgcggatgttcccgaaggtgggcgag
gtgatggctcgcaagctgtggatgctgtggctggcggagctgccggaggatgtgtctgcg
gtggacggtttcgcccaacgatggggtgtatgcaaggtggcggccggagtgaagggggca
tgggaggagtttctggagctgatggattccctgcggccggaggaggtttctctggctccg
ggggagatgctgaagcggattatggagtattacgagccgttcatgcaggcggagttcgat
aattatgaggatcgctggctggatctggagcagttgtgcgatgcggcggatgcgtttggc
ggtttggacgagtttttggcccagacggctcttttgagcaatacggatgaggatgagaag
ggggaggcccgtgcggaggtgacgctttccacgattcatcaggcgaaggggctggaatgg
aaggtggtgtttttgatttcgctgtgcgacgggatgttcccccaccaacgcgtgatcgat
gagggcgatccggatgggatggaggaggagctgcggctgttttatgtggcggtgacccgc
gccgaggatcagctttatatgagttatccccgtgtgaatagcaggtcgtacggttccggc
gggttttaccagtatccgtcgcggttcttgagttattgcccgtcggatttgatggagcag
tgggaggtgtga
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