Akkermansia glycaniphila: PYTT_2185
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Entry
PYTT_2185 CDS
T04551
Name
(GenBank) pd-(d/e)xk nuclease superfamily
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
agl
Akkermansia glycaniphila
Brite
KEGG Orthology (KO) [BR:
agl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agl03400
]
PYTT_2185
Enzymes [BR:
agl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PYTT_2185
DNA repair and recombination proteins [BR:
agl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
PYTT_2185
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Exonuc_V_gamma
Motif
Other DBs
NCBI-ProteinID:
SEH97105
UniProt:
A0A1H6MGX1
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All DBs
Position
I:2570495..2573473
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AA seq
992 aa
AA seq
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MTDRLPGVEFLGWEKPAAEAVAERLLEIGRQEALALSRCAVVVPTKESGRRLRALLAERS
DSKALLSPRVMLPGQLVEAGGDGVADEVAELAAWTAVLMDADAESFSRLFPVVPEAGREE
WAVGLAARLMKVRRELADHECDCAAVREALQASFGGEDGLDMWVDDEAERWLDLEKLAER
VDAMLRRWELQPPHEARAAMAGNACRREGVERLIVACVPELPFVLRRCLQELARACRVDI
WVHAPAELAGWFDAFGVPLEGWNTRDAGVPDSMIHVAAEERGMAAGCLRVMSAMPEAELQ
DVALGACDDRFVAALCTQFGDAGWPVYRPEGRALSASGWGLLMESLDRALDGGGRCEPFE
ALLRSPLVARAFGVRSLYGVCRLLDEVRRTRFPANAEDLPVALEAMGREGAEADLAACLS
AADYARKVGDWLARLGRDGSFAFAMLSLLDALSGAVLPHLPEYGMMEKLRRALETLRRLQ
TRRGVFAASRVALHVLMSWSRGVAAVERNREEFALDALGWMELAYSRERNVLVTGFHEGR
VPDVEVEDAFLPDRLRRVLGWEDSRLRTARDAFLLASLLEPRRAVGCVHFFVARQDPERN
PVQPSSLLLRCSDEELPARVRLLFETMEAVSRPRPFERGGWHLCAGQERMPDDGRNMEHI
SMLDAAASSRWADASRPFSPSLLARFLRCPLRFWLRELFGIDPDKDYPDRKRAMEFNEYG
TLVHGVLEDFVAEFPALRGGLDERGMARRILEMLDRRFASSYGERPLAPLMIQKRLAARS
LESFSARHLKDLQEGWENVGREAEFLWTMEQGVHLKIRIDRIDRHADGRIRIIDYKTGKA
MPCEDKHLEALKEDASIRFHHLLPMLPLVARERKGREELCRWKELQLPLYALAVMESGRY
GCTRQPETCYYNLPRQRGGVTVEAWVPDESLMDSVRQWTRETALMIREGRCLYSAEDLGL
SPYDDEIMNALAPDSLRAMLDLPQPAFPNLAD
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgacggacaggttgcctggcgtggagtttttggggtgggagaagcctgcggcggaagcg
gtggcagaacgtttgctggagatcggacgacaggaggcgctggcattgagtcgatgtgcc
gttgtcgtgccgacgaaggaatccggcaggcggttgcgtgctcttctggcagagaggtcg
gattccaaagctttgttgtcgccccgggtgatgctgccggggcagctggtggaagctggt
ggggatggtgtggcggacgaggtggctgagctggctgcatggaccgccgtgttgatggat
gcggatgcggagagtttttcccgcttgtttccggtcgtgccggaagcgggccgcgaggaa
tgggcggtcgggctggctgcacgcctgatgaaggtgcggcgcgagctggcggatcacgaa
tgcgattgtgcggctgtgcgcgaagctttgcaggcttccttcggaggggaagacggtttg
gatatgtgggtggatgatgaagccgagcgttggctggatctcgagaagctggctgagcgg
gtggatgccatgctgcgccgctgggagctgcagccccctcacgaagcgagggctgccatg
gccgggaatgcctgccgccgggagggtgtcgagcgcctgatcgtggcttgcgtgccggaa
cttccgtttgtgctgcgccgttgcctgcaggaattggcacgggcatgccgtgtggacatc
tgggtgcatgctccggcggagctggccggctggttcgatgccttcggggtgccgctggag
gggtggaatacgcgtgatgcaggagtaccggacagcatgatccatgtggcggcagaggaa
cggggtatggctgccgggtgccttcgcgtgatgtctgccatgccggaagcggaattgcag
gatgtggccctcggtgcctgcgacgatcgttttgtggcggcgctgtgtacgcaattcggc
gatgccgggtggcccgtgtaccggcctgaggggcgggcgttgtccgcttccggctgggga
ctgctgatggaatctctggatcgggcgctggatggcggggggaggtgcgagccgtttgaa
gcgttgctgcgctcgccgttggtagcaagggccttcggtgttcgctccctgtatggcgtg
tgccgtctgctggatgaggtgcgccggacccgctttcctgcgaacgcggaggatttgcct
gttgcgctggaagctatggggcgagagggggcggaggccgatcttgcggcctgcctgtcg
gcggcggattatgcccgcaaggtgggtgactggctggcacggttggggcgtgacggttcg
ttcgccttcgccatgctgtccctgctggatgccttgtcgggagcggtgctgccccatttg
ccggaatacggcatgatggagaagctgcgccgagcgttggagactctgcgccgcctgcaa
acgcgccggggtgtttttgcagccagccgggtggccctgcatgtgctgatgagctggtct
cggggcgtagctgccgtggagaggaaccgggaggagtttgctcttgatgcgctcggctgg
atggaattggcatacagccgtgaacggaatgtgctggtgaccgggttccatgaaggccgc
gtgccggatgtggaggtggaggatgcctttttgccggacaggctgcgccgcgtactcggc
tgggaagacagccggctgcgtacggcccgggatgccttcctcctcgcctctctgctggaa
ccgagacgtgcggtggggtgtgtgcattttttcgtggcgcggcaggatccggagcgcaat
cccgtgcagccgtcgtccctgctgcttcgctgttcggatgaagaacttccggcgcgtgtg
cgcctgttgttcgagacgatggaggccgtgtcccgcccccgtccgttcgaacgcggcggc
tggcatctgtgtgcggggcaggaacgcatgccggatgatggccggaatatggaacacatc
tccatgctggatgccgccgcatccagccgctgggccgatgcatcccggcctttttccccg
agcctgctggcgcggttcctgcgctgcccgctcaggttctggttgcgggagcttttcggc
atcgatccggacaaggattatcccgacaggaaacgcgccatggagttcaatgaatacggt
actctcgtgcatggcgtgctggaggatttcgtggcggaatttccagctctccgaggtggt
cttgatgagcggggaatggctcgccgtattctggagatgctcgaccgtcgcttcgcatcc
tcgtacggtgaacggccccttgccccgctgatgattcaaaagcggctcgcggcgagaagt
ctggaaagcttctccgcccggcacctgaaggatctgcaggaaggctgggagaatgtgggc
cgggaagcggaatttctctggacgatggaacagggcgtgcatctgaagattcgcatcgac
cgtatcgacaggcatgccgacgggcgtatccgcatcatcgattacaagacgggcaaggcg
atgccctgcgaggacaagcatttggaagccctgaaggaggatgcctccatccggttccac
catcttttgcccatgctgcctcttgtggcgcgcgagcgcaagggcagggaggagctgtgc
cgctggaaggagttgcaattgcccctgtatgcactggccgtgatggaaagcgggcggtac
ggctgcacgcggcagccggagacctgctactacaacctgccgcgccagcggggcggcgtt
accgttgaggcgtgggtgcccgatgaatcgctgatggacagtgtgcggcaatggacgcgg
gaaacggccctgatgattcgcgaaggccggtgcctgtattcggccgaagatctggggctt
tccccgtatgacgatgagatcatgaacgctctggctcccgactcgctgcgggcgatgctg
gatttgccccaacccgcctttccgaaccttgccgattga
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