Akkermansia glycaniphila: PYTT_2270
Help
Entry
PYTT_2270 CDS
T04551
Name
(GenBank) prokaryotic integration host factor signature
KO
K03530
DNA-binding protein HU-beta
Organism
agl
Akkermansia glycaniphila
Brite
KEGG Orthology (KO) [BR:
agl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agl03032
]
PYTT_2270
03036 Chromosome and associated proteins [BR:
agl03036
]
PYTT_2270
03400 DNA repair and recombination proteins [BR:
agl03400
]
PYTT_2270
DNA replication proteins [BR:
agl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PYTT_2270
Chromosome and associated proteins [BR:
agl03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PYTT_2270
DNA repair and recombination proteins [BR:
agl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PYTT_2270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
Motif
Other DBs
NCBI-ProteinID:
SEH98126
UniProt:
A0A1C7PDY8
LinkDB
All DBs
Position
I:2678545..2678814
Genome browser
AA seq
89 aa
AA seq
DB search
MNKAQLTELVRQNLGGSATKKAADYALAAVLDSIAEGIEKDGKVQILGFGTFLVKTRAAR
TGRNPKTGEPMTIPASTMVSFKASSSLKD
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggctcaacttacagaactcgttcgtcagaaccttggaggatccgctacgaaa
aaggcggctgattatgctcttgccgctgttttggattccattgccgaaggtattgaaaaa
gatggcaaggtgcagattctcggtttcggcacgttcctcgtcaagacgcgtgccgcacgt
acgggccgtaatccgaagacgggcgaaccgatgacgattcccgcatcgacgatggtttcg
ttcaaggcatcttcttctctgaaggactga
DBGET
integrated database retrieval system
