Akkermansia glycaniphila: PYTT_2278
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Entry
PYTT_2278 CDS
T04551
Name
(GenBank) nusa: transcription termination factor nusa
KO
K02600
transcription termination/antitermination protein NusA
Organism
agl
Akkermansia glycaniphila
Brite
KEGG Orthology (KO) [BR:
agl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agl03021
]
PYTT_2278
03009 Ribosome biogenesis [BR:
agl03009
]
PYTT_2278
Transcription machinery [BR:
agl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PYTT_2278
Ribosome biogenesis [BR:
agl03009
]
Prokaryotic type
rRNA transcription factors
PYTT_2278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
KH_KhpA-B
Sigma70_r4_2
CDC48_N
Motif
Other DBs
NCBI-ProteinID:
SEH98220
UniProt:
A0A1C7PBP9
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All DBs
Position
I:complement(2695385..2696659)
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AA seq
424 aa
AA seq
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MTSDIAALVDFYVREKELPRERVLQALESAFLTAYRKMVPGSEQIEQIFADINTQKGIVR
IKAIMTVVPDDDVTDAFNEVPLSLAQRKAAEIQPGDTLTVNITPSDFGRIAVQTARQTMQ
QSIRKAEQEMLMESFKDRAGDIVTGTVRRFDKGDIIVDIDKFEGIVPARQRIPGEDYAPN
DKMRFYICEVRDGVRGPEVILSRSHPNLVRRLFESEVVEIADHTVEIREIARDAGYRTKI
AVCSADPNVDPVGACVGMRGSRVKSIVNELNHEKIDILEWTEDKAAFVESAIAPVKPMSV
TVDEASREVRVIVEDDREVAKAIGRKGQNARLTARLISTPSEKWDVKVRAYDPQAEINQR
LKDAAKALAKELEIGDEIAFGLITMGGTTASAIVGMPAADIAENLNITPEEAEAIISRAR
TIAG
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgacttccgatatcgccgcccttgtcgatttctatgttcgcgaaaaggaacttccccgc
gaacgcgttcttcaggccctcgaatcagccttcctgaccgcctaccgcaagatggttccc
ggatccgaacagatcgaacagatcttcgcagacatcaacacgcagaaaggcatcgtccgc
atcaaggccatcatgaccgtcgtgcctgacgacgacgtcacggacgccttcaacgaagtc
cccctcagcctcgcccagcgcaaggctgccgaaatccagcccggcgacaccctcaccgtc
aacatcacgccgtccgacttcggccgcatcgccgtccagacggcccgccagaccatgcag
cagagcatccgcaaggcggaacaggaaatgctgatggaatccttcaaggaccgcgccggc
gacatcgtcaccggtaccgtacgccgcttcgacaagggcgacatcatcgtggacatcgac
aagttcgaaggcatcgtgcccgcccgccagcgcatccccggcgaagactacgcgcccaac
gacaaaatgcgcttctacatctgcgaagtgcgcgatggagtccgcggcccggaagtcatc
ctctcccgcagccatccgaacctcgtccgccgcctcttcgaatccgaagtcgtcgaaatc
gccgaccacaccgtcgaaatccgtgaaatcgcccgcgacgccggctaccgcaccaagatc
gccgtctgcagcgcagatcccaacgtggaccccgtcggcgcctgcgtcggcatgcgcggc
tcccgcgtcaagagcatcgtcaacgaactcaaccacgaaaaaatcgacatcctcgaatgg
acggaagacaaggcagccttcgtcgaatccgccatcgctcccgtcaaaccgatgagcgtc
accgtcgatgaagcctcccgcgaagtacgcgtcatcgtcgaagacgaccgcgaagtcgcc
aaggccatcggccgcaagggacagaacgcccgcctcaccgcgcgcctcatctccaccccc
tccgaaaaatgggacgtcaaggtacgcgcctacgatccgcaggccgaaatcaaccagcgc
ctcaaggatgccgccaaggctctcgccaaggaacttgaaatcggcgacgaaatcgccttc
ggcctcatcaccatgggcggcaccaccgcctccgccatcgtcggcatgcctgctgcggac
atcgccgaaaacctgaacatcacccccgaagaagcagaagccatcatcagccgcgcccgg
accatcgccggctaa
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