Akkermansia glycaniphila: PYTT_2374
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Entry
PYTT_2374 CDS
T04551
Name
(GenBank) prokaryotic integration host factor signature
KO
K03530
DNA-binding protein HU-beta
Organism
agl
Akkermansia glycaniphila
Brite
KEGG Orthology (KO) [BR:
agl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agl03032
]
PYTT_2374
03036 Chromosome and associated proteins [BR:
agl03036
]
PYTT_2374
03400 DNA repair and recombination proteins [BR:
agl03400
]
PYTT_2374
DNA replication proteins [BR:
agl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PYTT_2374
Chromosome and associated proteins [BR:
agl03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PYTT_2374
DNA repair and recombination proteins [BR:
agl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PYTT_2374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
Motif
Other DBs
NCBI-ProteinID:
SEH99253
UniProt:
A0A1C7P9N6
LinkDB
All DBs
Position
I:complement(2817472..2817738)
Genome browser
AA seq
88 aa
AA seq
DB search
MNKAQLIDSIQKNLGEGATRKCAAAALDAVLTSITTAVKTEKVQIIGFGTFETKSRPART
GHNPKTGATMQIPASKTVAFKASSALKK
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagctcaactcatcgattccatccagaagaatctcggtgaaggtgcaacccgc
aagtgcgctgctgcagccctcgacgcagttcttacgtccatcacgaccgcagtcaagacc
gaaaaggttcagatcatcggtttcgggacgtttgaaaccaagtcccgtccggctcgcact
ggccacaatcccaagacaggcgctacgatgcagatccccgcttccaagacggtggcattc
aaggcatcctctgccctcaaaaagtaa
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integrated database retrieval system
