Actinacidiphila glaucinigra: OIE69_06770
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Entry
OIE69_06770 CDS
T09685
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
agla
Actinacidiphila glaucinigra
Brite
KEGG Orthology (KO) [BR:
agla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agla03021
]
OIE69_06770
Transcription machinery [BR:
agla03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OIE69_06770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
PhyR_sigma-like
HTH_Crp_2
HTH_23
MarR
KORA
Motif
Other DBs
NCBI-ProteinID:
WSD58632
LinkDB
All DBs
Position
complement(1536689..1537555)
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AA seq
288 aa
AA seq
DB search
MIADVSGTSTGVESPEVDVLPQIADPSSVAPTSARRLSKLFLERLTVLEEGTQEYQYARN
TLIEMNMSLVRFAARRFRDRSDEMEDIVQVGTIGLIKAIDRFDISREVEFTTFAVPYIVG
EIKRFFRDTTWAVHVPRRLQERRVELARARDELSSRLGRAPKVSELAALMDISEAEVVEA
QVASNGYTASSLDAAMNGDDGDDGETVLADFIGAVDPAMELVEDLGSLAPLVVELGDRDR
QLLHLRYVEELTQAQIGEIMGCTQMHVSRLLSRTLARLRAGLLQDGCA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgccgacgtgagcgggacgagcaccggggtcgagagccccgaggtcgacgtactg
ccgcagatcgccgacccgagcagcgtggctcccacgagcgcgcgccgcctgtcgaagctc
ttcctcgagcgcctcacggtgctcgaggagggaacccaggagtaccagtacgcccgcaac
accctcatcgagatgaacatgtcgctcgtgcggttcgcggccaggcgcttccgcgaccgc
agcgacgagatggaggacatcgtccaggtcgggacgatcgggctgatcaaggccatcgac
cggttcgacatctcgcgcgaggtggagttcaccaccttcgcggtgccgtacatcgtcggt
gagatcaagcggttcttccgcgacacgacctgggccgtgcacgtgccgcgccgcctccag
gagcgccgggtggagctggcccgcgcccgggacgagctgtcctcccggctgggccgcgcc
ccgaaggtgagcgagctcgcggcactcatggacatctccgaggccgaggtcgtcgaggcc
caggtggcctccaacggctacaccgcctcctcccttgacgcggccatgaacggcgacgac
ggcgacgacggcgagacggtgctcgccgacttcatcggcgcggtcgaccccgccatggaa
ctcgtcgaggacctcggctcgctcgcaccgctcgtcgtggagctcggtgatcgcgatcgg
cagctgctccatctgcggtacgtggaggaactgacgcaggcccagatcggggagatcatg
ggctgcacgcagatgcacgtctcgcggctgctctcgcgcaccctggcccggctgcgggcc
ggactcctccaggacggctgcgcctga
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