Actinacidiphila glaucinigra: OIE69_13000
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Entry
OIE69_13000 CDS
T09685
Name
(GenBank) HAMP domain-containing protein
Organism
agla
Actinacidiphila glaucinigra
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
HisKA
GAF_2
GAF
OKR_DC_1_N
HMMR_N
ATG14
RNase_Y_N
Nup49_C
Motif
Other DBs
NCBI-ProteinID:
WSD65328
LinkDB
All DBs
Position
complement(2982445..2987763)
Genome browser
AA seq
1772 aa
AA seq
DB search
MRDGNFRKRLTVTGDGVMAEISAVFNEVADRNQHLTGELARVRRVVGREGKLAERLETGA
CEGAWAAAIDASNALVDDLVRPMSEVGRVLSAVAEGDLEQRMDLRAQGADGSGHPLRGEF
LKVGRTVNGLVDQLSTFTDEVTRVASEVGTEGKLGGQARVRGMSGSWKDLTDSVNTMASR
LTAQVRDIALVTTAVAKGDLSRKVTVHVAGEMLELKNTVNTMVDQLSSFAAEVTRVAREV
GTEGQLGGQAKVAGVDGVWKDLTDSVNLMAGNLTAQVRDIAQVTTAVANGDLSQKITIGA
RGEVAQLAETVNAMTETLRTFADEVTRVAGEVGADGRLGGQAQVPGAAGIWKDLTDSVNT
AFRNLTGQVRDIAQVTTAVANGDLSQKVTVDVSGEMLELKNTVNTMVDQLSAFGAEVTRV
AREVGVEGELGGQAQVPGAAGLWKDLTDSVNTAFRNLTGQVRNIAQVTTAVANGDLSQKV
TVDVSGEMLELKNTVNRMVDQLSSFAGQVTRMARDVGTEGRLGGQARVDGVSGVWKELTD
SVNFMAGNLTSQVRQIAQVTTAVARGDLSQKVDVDARGEILELKNTINTMVDQLSSFAEQ
VTRVAREVGTEGRLGGQAQVPGVAGVWRDLTDSVNGMAGNLTAQVRNIAQVATAVARGDL
SQKIDVDARGEILELKNVLNTMVDQLSSFAEQVTRVAREVGTEGILGGQAEVKGVSGTWK
DLTQSVNFMANNLTMQVRNIAEVTTAVAQGDLSKKITVDAKGEILALVTTVNTMVDQLSA
FGDEVTRVAREVGTEGQLGGQARVRDVSGIWKDLTDNVNLMANNLTSQVRSISSVATAVA
NGDLTKKITVEARGEVAQLAETINTMVDTLSAFGDEVTRVAREVGTDGILGGQARVPGVS
GSWKDLTESVNNMASNLTGQVRNIAMVTTAVARGDLSKKIDVDAHGEILELKTTINTMVD
QLSAFGDQVTRVAREVGTEGRLGGQARVPGVSGIWKDLTESVNLMANNLTRQVRNIAQVA
TAVTRGDLNIRTDVDAAGEILELQDYINTMIVRLRETTLANKEQDWLKGNLARISGLMQG
RRDLNDVAALIMSELTPVVSAQHGAFFIAEEPAGGEEIDEGYELRLSGSYGFSKRTMPTV
FLPGEGLIGTAAVEKRSILVEDVPPGYLRISSGLGEAPPAHVIVLPVVFEDRVLGVMELA
SFQPLTQIQKDFLGQITDMIAVSVNTISVNTKTEYLLEQSQELTEQLRERSAELENRQKQ
LEMSNTELEEKAELLARQNRDIEVKNTEIEEARQVLEERAEQLAVSMRYKSEFLANMSHE
LRTPLNSLLILAKLLADNAEGNLSPKQVEFAETIHGAGSDLLQLINDILDLSKVEAGKMD
VSPTRIALVQLVDYVEATFRPLTAEKGLDFSVRVSPELPATLHTDEQRLLQVLRNLLSNA
VKFTDSGSVELVIRPAGPDVPQAIREQLLESGSLRGADEPLIAFSVTDTGIGIAASKMRV
IFEAFKQADGTTSRKYGGTGLGLSISREIARLLGGEIHADSQPGRGSTFTLYLPLNTTEL
PPQGYLQLPGGEAAELEGAPVEPLHAPAHGHVAVRGRGAGSSLARLRRRSAATPRPAAAA
GPVERAALPESWVEGAHSDAYTGFAGGFSGEKVLIVDDDIRNVFALTSVLEQHGLTVLYA
ENGREGIEVLEQHDDVAVVLMDIMMPEMDGYATTAAIRRMPQFAGLPIIALTAKAMKGDR
EKSIESGASDYVAKPVDTDHLLAVMEQWMQSR
NT seq
5319 nt
NT seq
+upstream
nt +downstream
nt
atgcgggacggcaacttccgcaagaggctgacggtcaccggcgacggggtcatggcggag
atctccgcggtgttcaacgaagtcgccgaccgcaaccagcacctcaccggggagctggcg
cgggtgcggcgggtcgtgggccgggagggcaagctcgcggagcgcctggagacgggggcg
tgcgagggcgcctgggcggcggccatcgacgcatccaacgcgctcgtggacgacctcgtg
cgccccatgtccgaggtcggccgggtgctgtcggcggtcgcggagggcgacctggagcag
cggatggacctgcgcgcgcagggcgccgacggttccgggcatccgctgcgcggcgagttc
ctcaaggtgggccgcaccgtcaacgggctggtcgaccagctgtccacgttcaccgacgag
gtgacccgggtggcgagcgaggtcggcaccgagggcaagctcggcggccaggcgcgggtg
cgcggcatgtccggctcgtggaaggacctcacggactcggtcaacaccatggcgtcccgt
ctgacggcccaggtgcgtgacatcgccctcgtcacgacggcggtcgccaagggcgacctg
tcgcgcaaggtcaccgtgcacgtggccggcgagatgctggagctgaagaacaccgtcaac
acgatggtcgaccagctctcctccttcgccgccgaggtgacccgcgtcgcgcgcgaggtg
ggcaccgagggccagctgggcggccaggccaaggtggccggggtcgacggcgtgtggaag
gacctcacggactccgtcaacctgatggccggcaatctgacggcccaggtgcgtgacatc
gcccaggtgaccaccgcggtcgccaacggcgacctgtcgcagaagatcaccatcggcgcg
cgcggcgaggtcgcgcagctcgccgagacggtcaacgcgatgaccgagacgctgcgcacc
ttcgccgacgaggtgacccgtgtcgcgggcgaggtcggcgcggacggccggctcggcggc
caggcgcaggtaccgggcgcggcgggcatctggaaggacctcaccgactcggtgaacacc
gcgttccgcaacctgaccggccaggtgcgggacatcgcgcaggtgacgacggcggtcgcc
aacggcgacctgtcgcagaaggtgacggtggacgtctccggcgagatgctggagctgaag
aacaccgtcaacacgatggtggaccagctgtcggccttcggtgccgaagtgacccgagtg
gcgcgtgaggtcggcgtcgagggagagctgggcggccaggcgcaggtaccgggtgcggcg
ggtctgtggaaggacctgacggattcggtgaacaccgcgttccgcaacctgaccggccag
gtccgcaacatcgcgcaggtgacgacggcggtcgccaacggcgacctgtcgcagaaggtc
acggtggacgtctccggcgagatgctggagctgaagaacaccgtgaaccgcatggtggac
cagctgtcctcgttcgccggacaggtcacgcgtatggcccgggacgtgggcacggagggc
cgcctcggcggtcaggcccgcgtcgacggcgtgagcggcgtgtggaaggagctgacggac
tccgtcaacttcatggcgggcaacctcacctcgcaggtgcgccagatcgcgcaggtgacg
acggcggtggcccgcggtgacctctcccagaaggtcgacgtcgacgcgcgcggcgagatc
cttgagctgaagaacaccatcaacacgatggtcgaccagctctcctccttcgccgagcag
gtgacccgggtggcccgcgaggtcggcaccgagggacggctcggcggccaggcgcaggtg
cccggggtggccggcgtgtggcgcgacctgaccgactccgtgaacggcatggcgggcaac
ctgaccgcgcaggtccgcaacatcgcccaggtggccaccgcggtggcccgcggcgacctc
tcccagaagatcgacgtcgacgcgcgcggcgagatcctggaactgaagaacgtcctcaac
acgatggtcgaccagctctcctccttcgccgagcaggtgacccgggtggcccgcgaggtg
ggcaccgagggcatcctgggcggccaggccgaggtgaagggcgtgtcgggcacctggaag
gacctgacgcagtccgtcaacttcatggcgaacaacctcaccatgcaggtccgcaacatc
gccgaggtcaccaccgcggtcgcccagggcgacctgtccaagaagatcaccgtcgacgcc
aagggcgagatcctcgccctggtcaccaccgtgaacacgatggtcgaccagctgtccgcc
ttcggtgacgaggtgacccgggtggcccgcgaggtgggcaccgagggccagctgggcggc
caggcgcgggtgcgggacgtctccggcatctggaaggacctcaccgacaacgtcaacctg
atggccaacaacctgaccagccaggtgcgttcgatctcctccgtcgccaccgccgtcgcc
aacggcgacctcaccaagaagatcaccgtcgaggcgcgcggcgaggtcgcccagctcgcc
gagaccatcaacacgatggtcgacacgctctccgccttcggtgacgaggtgacccgggtg
gcccgcgaggtgggcaccgacggcatcctcggcggtcaggcgcgcgtgccgggtgtgtcc
ggctcgtggaaggacctcaccgagtcggtcaacaacatggcctccaacctgaccggccag
gtccgcaacatcgccatggtcaccaccgcggtcgcccgcggagacctgtccaagaagatc
gacgtcgacgcgcacggggagatcctggagctgaagacgaccatcaacacgatggtcgac
cagctctccgccttcggtgaccaggtgacccgggtggcccgcgaggtgggcaccgagggc
cgcctgggcggccaggcgcgcgtgccgggagtctccggcatctggaaggacctcaccgag
tcggtgaacctgatggcgaacaacctgacccgtcaggtccgcaacatcgcccaggtggcc
accgcggtgacccgcggcgacctcaacatccgcacggacgtggacgcggcgggcgagatc
ctggagctccaggactacatcaacaccatgatcgtccgactccgcgagaccacgctcgcc
aacaaggagcaggactggctcaagggcaacctcgcccgcatctccggtctgatgcagggc
cgccgcgacctcaacgacgtggcggcgctcatcatgagcgagctgaccccggtggtctcc
gcccagcacggcgccttcttcatcgcggaggagccggccggcggggaggagatcgacgaa
ggctacgagctgcggctgagcggctcgtacggcttctccaagcggacgatgccgacggtg
ttcctgcccggagaggggctgatcggcacggccgccgtcgagaagcgctcgatcctggtg
gaggacgtgccgccgggctacctgcggatctcctccggtctcggcgaggcgccgccggcc
catgtcatcgtgctgccggtggtgttcgaggaccgggtgctcggtgtcatggagctggcc
tccttccagccgctcacccagatccagaaggacttcctcggccagatcaccgacatgatc
gcggtcagcgtgaacaccatcagcgtgaacaccaagaccgagtacctgctggagcagtcg
caggagctgaccgagcagctgcgggagcgctcggcggagctggagaaccggcagaagcag
ctggagatgtccaacacggagctggaggagaaggcggagctgctggcccgccagaaccgg
gacatcgaggtgaagaacaccgagatcgaggaggcccggcaggtcctggaggagcgcgcc
gagcagttggccgtctcgatgcgctacaagtccgagttcctggccaacatgtcgcacgag
ctgcgcaccccgctcaactcgctgctcatcctggccaagctgctcgcggacaacgccgag
ggcaatctctccccgaagcaggtcgagttcgccgagacgatccacggcgccggctcggac
ctgctgcagctcatcaacgacatcctggacctgtccaaggtcgaggcgggcaagatggac
gtcagcccgacccgcatcgccctggtccagctggtcgactacgtggaggcgaccttccgg
cccctcacggcggagaagggcctggacttctcggtacgggtctccccggagctgcccgcc
acactccacaccgacgagcagcggctgctgcaggtgctgcgcaacctgctgtcgaacgcg
gtcaagttcaccgacagcggctcggtcgaactggtcatccgcccggccggccccgacgtg
ccgcaggcgatccgggagcagttgctggagtccggctcgctgcggggcgcggacgagccg
ctgatcgccttctccgtgaccgacaccggcatcggcatcgcggcgagcaagatgcgggtc
atcttcgaggccttcaagcaggcggacggcaccaccagccgcaagtacggcggtacgggc
ctgggcctgtccatcagccgggagatcgcccggctgctcggcggcgagatccacgccgac
agccagcccggccgcggctcgaccttcaccctctacctgccgctcaacaccaccgaactg
ccgccccagggctacctgcagctccccggcggcgaggccgccgaactcgagggagcaccg
gtcgagccgctccacgcccccgcgcacggccatgtggcggtgcgcggccggggcgcgggc
agcagcctggcccggctgcgccggcgttcggcggcaaccccgcggcccgcggcggccgcc
gggccggtggaacgcgccgcgctgcccgagtcgtgggtggagggcgcgcacagcgacgcc
tacaccggcttcgcgggcgggttcagcggtgagaaggtgctcatcgtcgacgacgacatc
cgcaacgtcttcgccctcaccagcgtgctggagcagcacgggctgaccgtgctgtacgcg
gagaacggccgggaggggatcgaggtcctggagcagcacgacgacgtcgccgtggtgctg
atggacatcatgatgcccgagatggacggttacgcgaccacggccgcgatccgcaggatg
ccccagttcgccgggctgccgatcatcgcgctgacggcgaaggcgatgaagggcgaccgg
gagaagagcatcgagtccggggcgtccgactacgtcgccaagccggtggacaccgaccac
ctgctcgcggtgatggagcagtggatgcagtccaggtga
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