Actinacidiphila glaucinigra: OIE69_17580
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Entry
OIE69_17580 CDS
T09685
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
agla
Actinacidiphila glaucinigra
Pathway
agla03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
agla00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OIE69_17580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agla03021
]
OIE69_17580
03400 DNA repair and recombination proteins [BR:
agla03400
]
OIE69_17580
Enzymes [BR:
agla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OIE69_17580
Transcription machinery [BR:
agla03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OIE69_17580
DNA repair and recombination proteins [BR:
agla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OIE69_17580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
WSD60607
LinkDB
All DBs
Position
complement(3997671..3998693)
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLAEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVRIDGVL
HEFTTVPGVKEDVTDLILNIKSLVVSSEHDEPVVMYLRKQGPGVVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQQGQEIGRIPVDSIYSPVLKVSYKVEA
TRVEQRTDFDKLVVDVETKPAMRPRDAVASAGKTLVELFGLARELNVDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTSAADTFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctcagcgcccctcgttggccgaagaggtcgtcgacgagttccgttcccgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggcaattcgctccgccgc
acgctcctctcctcgattccgggtgccgctgtcacctcggtccggatcgacggcgtcctg
cacgagttcaccaccgtgccgggtgtcaaggaggacgtcaccgacctcatcctgaacatc
aagtccctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggtccgggtgtggtcaccgccgccgacatcgcgcctccggccggtgtcgaggtgcacaac
cccgatctggtgctggccactctgaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctcggccgtgcagaacaagcagcagggccaggagatcggc
cgtattccggtcgactcgatctacagcccggtgctcaaggtcagctacaaggtcgaggcg
acccgtgtcgagcagcgcaccgacttcgacaagctggtcgtcgatgtcgagaccaagccc
gcgatgcgtcctcgtgacgcggtggcctcggccggcaagacgctggtcgagctgttcggt
ctcgcccgcgagctgaacgtcgacgccgagggcatcgacatgggcccgtccccgacggac
gccgccctggcggcggacctcgcgctcccgatcgaggagctcgagctcaccgtccgttcc
tacaactgcctcaagcgcgagggcatccactccgtgggtgagctcgtggcgcgttccgag
gccgacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggcgaag
ctggccggcatgggcctggccctgaaggacagcccgcccggattcgacccgacctccgcc
gccgacaccttcggtgcggacgacgacgccgacgccggcttcgtcgagaccgagcagtac
tga
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