Actinacidiphila glaucinigra: OIE69_20645
Help
Entry
OIE69_20645 CDS
T09685
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
agla
Actinacidiphila glaucinigra
Brite
KEGG Orthology (KO) [BR:
agla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agla03032
]
OIE69_20645 (gyrB)
03400 DNA repair and recombination proteins [BR:
agla03400
]
OIE69_20645 (gyrB)
Enzymes [BR:
agla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
OIE69_20645 (gyrB)
DNA replication proteins [BR:
agla03032
]
Prokaryotic type
DNA Topoisomerases
OIE69_20645 (gyrB)
DNA repair and recombination proteins [BR:
agla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OIE69_20645 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
WSD65437
LinkDB
All DBs
Position
4620193..4622235
Genome browser
AA seq
680 aa
AA seq
DB search
MLCQKGRFVADSGNPNEINTSAADGSAAPASGAAYDASAITVLEGLDAVRKRPGMYIGST
GERGLHHLVYEVVDNSVDEALAGHADTINVTILPDGGVRVIDNGRGIPVDIVPSEGKPAV
EVVLTVLHAGGKFGGGGYAVSGGLHGVGVSVVNALSTKVAVEVKREGFRWTQDYKMGVPT
APLQKNEEVSENGTSVTFWADGDIFETLEYSFETLSRRFQEMAFLNKGLTISLTDERPEH
ADVENEGQPRSVAYHYEGGIVDFVKYLNSRKGETVHPSVIDIDAEDKERMLSVEVAMQWN
TQYSEGVYSFANTIHTHEGGTHEEGFRAALTTLVNKYAREKKLLREKDDNLTGEDIREGL
TAIISVKLGEPQFEGQTKTKLGNTEAKTFVQKVVHEHLTDWLDRNPNEAADIIRKSIQAA
TARVAARKARDLTRRKGLLETASLPGKLSDCQSNDPAKCEIFIVEGDSAGGSAKSGRNPQ
YQAILPIRGKILNVEKARIDKILQNTEIQALISAFGTGVHEDFDISKLRYHKIILMADAD
VDGQHINTLLLTFLFRFMRPLVEAGHVYLSRPPLYKIKWGRDDFEYAYSDSERDALIELG
RQNGKRVREDSIQRFKGLGEMNAEELRVTTMDVDHRVLGQVTLDDAALADDLFSVLMGED
VEARRSFIQRNAKDVRFLDI
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
gtgctgtgccagaaagggcgcttcgtggccgattccggcaaccccaacgagatcaatacg
tccgcagctgacggctccgccgcgcccgcctcaggcgcggcgtacgacgccagcgcgatc
accgtcctggagggcctggacgcggttcgcaagcgcccgggcatgtacatcggctcgacg
ggcgagcgcggcctgcaccacctggtgtacgaggtcgtcgacaactccgtcgacgaggcg
ctggccggtcatgcggacaccatcaacgtcacgatcctccccgacggcggcgtgcgcgtc
atcgacaacggccgcggcatccccgtggacatcgtgccgtcggagggcaagcccgccgtc
gaggtcgtgctgaccgtcctccacgccggcggcaagttcggcggcggcggttacgccgtc
tccggcggtctgcacggcgtcggcgtctccgtggtgaacgccctgtcgacgaaggtcgcg
gtcgaggtcaagcgtgagggcttccgctggacccaggactacaagatgggcgtcccgacc
gccccgctgcagaagaacgaggaggtttcggagaacggcacctcggtgaccttctgggcc
gacggggacatcttcgagaccctcgagtactccttcgagacgctctcgcgccgcttccag
gagatggccttcctgaacaagggcctgaccatctcgctcaccgacgagcgccccgagcac
gcggacgtggagaacgagggccagccgcgctcggtcgcgtaccactacgagggcggcatc
gtcgacttcgtgaagtacctgaactcgcgcaagggcgagacggtccacccgtcggtgatc
gacatcgacgcggaggacaaggagcggatgctctccgtcgaggtcgcgatgcagtggaac
acccagtacagcgagggtgtctacagcttcgccaacaccatccacacccatgagggcggc
acccacgaggagggcttccgcgccgcgctgaccacgctggtcaacaagtacgcgcgcgag
aagaagctgctccgggagaaggacgacaacctcaccggcgaggacatccgcgagggcctg
accgcgatcatctcggtcaagctgggcgagccgcagttcgagggccagaccaagaccaag
ctcggcaacaccgaggcgaagaccttcgtccagaaggtcgtgcacgagcacctgacggac
tggctggaccgcaaccccaacgaggccgcggacatcatccgcaagtcgatccaggcggcc
accgcccgtgtcgccgcccgcaaggcgcgcgatctgacgcgccgcaagggcctgctggag
acggcgtcgctgccgggcaagctgagcgactgccagtccaacgaccccgccaagtgcgag
atcttcatcgtcgagggtgactccgccggcggctcggccaagtccggccgcaacccgcag
taccaggcgatcctcccgatccgcggcaagatcctgaacgtggagaaggcgcggatcgac
aagatcctgcagaacacggagatccaggcgctgatctcggccttcggcaccggtgtgcac
gaggacttcgacatctcgaagctgcgctatcacaagatcatcctgatggccgacgccgac
gtggacggccagcacatcaacaccctgctgctgaccttcctgttccgcttcatgcggccg
ctggtcgaggcgggccacgtgtacctctcccgtcctccgctctacaagatcaagtggggc
cgggacgacttcgagtacgcgtactcggactccgagcgcgacgccctgatcgagctgggc
cgccagaacggcaagcgcgtgcgcgaggactcgatccagcgcttcaagggcctcggcgag
atgaacgccgaggaactgcgggtcaccacgatggacgtcgaccaccgcgtgctcggccag
gtcaccctggacgacgcggccctcgccgacgacctgttctcggtgctgatgggcgaggac
gtcgaggcccggcgctccttcatccagcgcaacgccaaggatgtccgcttcctcgacatc
tga
DBGET
integrated database retrieval system
