Actinacidiphila glaucinigra: OIE69_22205
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Entry
OIE69_22205 CDS
T09685
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
agla
Actinacidiphila glaucinigra
Pathway
agla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OIE69_22205 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agla03021
]
OIE69_22205 (rho)
03019 Messenger RNA biogenesis [BR:
agla03019
]
OIE69_22205 (rho)
Transcription machinery [BR:
agla03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
OIE69_22205 (rho)
Messenger RNA biogenesis [BR:
agla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OIE69_22205 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
AAA_22
NACHT
Spore_III_AA
Ntox28
Motif
Other DBs
NCBI-ProteinID:
WSD61421
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All DBs
Position
4954550..4955704
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AA seq
384 aa
AA seq
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MAINTADTTNTPTATTAPRERLVAVAGVLDVEGGRGFLRTAGYAQGPHDVPVPPEVIRRY
GLRKGDVVEGVATAGRSRALVRAEQVCGRPADLARGRRHFADLTPLHPSERLRLECSKGG
LTTRVVDLLAPVGKGQRGLIVAPPKAGKTMLLRRLADAVADNHPECHLMVVLLDERPEEV
TEMRRSVRGEVVASTFDRTPRQHIAVAELAVERAKRLVETGRDVVVLLDSLTRLCRAHNN
AASSGGRTLSGGVDAAALLGPKRLFGSARLAEEGGSLTILATALVDTGSRADDYFFEELK
STGNMELRLDRGLADRRVFPAVDVAPSGTRREELLLSPAELSAARGLRRALRGAGSFETL
LERLRATPDNAAFLRQIRGTVPAA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcaacacagccgacacaaccaacacacccaccgcgaccacggctccccgggaa
cgactcgtcgccgtggccggagtcctcgacgtcgagggcggacgcggcttcctgcgcacc
gccggttacgcgcaaggtccgcacgacgtcccggtgcctccggaggtgatcaggcggtac
gggctgcgcaagggcgacgtcgtcgagggcgtggccacggccggccgctcgcgcgccctc
gtacgggccgagcaggtgtgcggccgccccgccgacctggcccgcgggcggcggcacttc
gccgacctgaccccgctccacccctccgagcggctgcgcctggagtgctccaagggcggt
ctgacgacccgtgtcgtggacctgctggcccccgtcggcaagggccagcgcgggctgatc
gtggcgccgccgaaggccggcaagaccatgctgctgcgccggctggccgacgcggtcgcg
gacaaccacccggagtgccacctgatggtggtgctcctggacgaacgccccgaggaggtc
acggagatgcggcggtcggtgcggggcgaggtcgtcgcctcgaccttcgaccgcacgccc
cggcagcacatcgccgtcgccgaactggccgtcgagcgggccaaacggctggtcgagacc
ggccgggacgtggtcgtgctgctggactccctcacccggctgtgccgggcccacaacaac
gcggcgtcctcgggcgggcggacgctgtccgggggcgtggacgcggcggcgctgctcggc
ccgaagcggctgttcggctccgcgcggctcgcggaggagggcggttcgctgaccatcctg
gccaccgcgctggtcgacaccgggtcgcgggccgacgactacttcttcgaggagctgaag
agcaccggcaacatggaactgcgcctggaccgcgggctcgccgaccgcagggtcttcccg
gccgtggacgtggccccgtcggggacccggcgcgaggagctgctgctcagccccgccgaa
ctgagcgccgcgcgcgggctgcgccgggcgctgcgcggtgcggggagcttcgagacgctg
ctggagcggctgcgggcgaccccggacaacgccgcgttcctgcggcagatccgcggcacg
gtgccggccgcctga
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