Actinacidiphila glaucinigra: OIE69_24215
Help
Entry
OIE69_24215 CDS
T09685
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
agla
Actinacidiphila glaucinigra
Brite
KEGG Orthology (KO) [BR:
agla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agla03021
]
OIE69_24215
Transcription machinery [BR:
agla03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OIE69_24215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
MarR_2
HTH_Crp_2
DUF7343
HTH_23
MarR
HTH_3
GerE
PF0095-like_C
Motif
Other DBs
NCBI-ProteinID:
WSD61781
LinkDB
All DBs
Position
complement(5377133..5378017)
Genome browser
AA seq
294 aa
AA seq
DB search
MAPRLDAHDASATTEAGVHEEHGTPEGLEDLPEIPPFDEVGPVDARALSKTLFQRLETLE
EGTYEYSYVRNTLVELNLALVKFAASRFRSRSEPVEDIIQVGTIGLIKAIDRFELSRGVE
FPTFAMPTIIGEIKRFFRDTSWSVRVPRRLQELRLDLAKAGDELAQQLDRAPTVTELADR
LQITEAEVVEGMSASNAYTASSLDAQPEEDDTEGALADRIGYEDHGLEGIEYVESLKPLI
AELPARDRQILSLRFVGNMTQSEIGVELGISQMHVSRLLSRTLGRLRRGLLVEE
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcaccccgtctcgacgcgcacgacgcgtcggcgaccaccgaggccggcgtccacgag
gaacacggaacaccggagggcctggaggacctcccggagatcccgcccttcgacgaagtg
ggtccggtcgacgcacgggccctgtccaagacgctcttccagcgactcgagacgctggag
gagggcacctatgagtacagctatgtacgcaacaccctggtcgagctcaatctcgccctg
gtgaagttcgccgcctcccggttccgctcccgcagcgagccggtcgaggacatcatccag
gtgggcacgatcgggctgatcaaggccatcgaccgcttcgagctgagccgcggggtcgag
ttccccacgttcgcgatgccgaccatcatcggcgagatcaagcgcttcttccgggacacc
tcctggtccgtgcgggtgccgaggcggctgcaggagctgcggctggacctggccaaggcc
ggtgacgagctcgctcagcagctggaccgcgcgccgaccgtcaccgagctggccgaccgg
ctgcagatcaccgaggccgaggtcgtcgagggcatgagcgcgagcaacgcgtacaccgcg
agctcgctggacgcccagcccgaggaggacgacaccgaaggggcgctcgccgaccgcatc
ggctacgaggaccacggtctggaggggatcgagtacgtggagtccctcaagccgctgatc
gccgagctcccggcacgcgaccggcagatcctctcgttgcgcttcgtgggcaacatgacg
cagtccgagatcggcgtcgagctgggcatctcccagatgcatgtgtcgcggctgctcagc
cgcaccctcgggcgtctgcggcgggggctgctcgtggaggagtga
DBGET
integrated database retrieval system
