Actinacidiphila glaucinigra: OIE69_28635
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Entry
OIE69_28635 CDS
T09685
Name
(GenBank) AMP-dependent synthetase/ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
agla
Actinacidiphila glaucinigra
Pathway
agla00061
Fatty acid biosynthesis
agla00071
Fatty acid degradation
agla01100
Metabolic pathways
agla01212
Fatty acid metabolism
agla02024
Quorum sensing
agla04146
Peroxisome
Module
agla_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
agla00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
OIE69_28635
00071 Fatty acid degradation
OIE69_28635
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
OIE69_28635
09145 Cellular community - prokaryotes
02024 Quorum sensing
OIE69_28635
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
agla01004
]
OIE69_28635
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
agla04147
]
OIE69_28635
Enzymes [BR:
agla01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
OIE69_28635
Lipid biosynthesis proteins [BR:
agla01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
OIE69_28635
Exosome [BR:
agla04147
]
Exosomal proteins
Exosomal proteins of breast milk
OIE69_28635
Exosomal proteins of breast cancer cells
OIE69_28635
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
WHD_DUF6293
Motif
Other DBs
NCBI-ProteinID:
WSD62579
LinkDB
All DBs
Position
complement(6367875..6369671)
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AA seq
598 aa
AA seq
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MREFSLPALYEVPADGNLTDLIRRNAAQHPDVSVIARKTAAGDWADVTATAFLAEVRAAA
RGLIASGVQPGDRVALISRTRYEWTLFDFAVWTAGAVTVPVYETSSAEQIEWILGDSGAV
AAVVETEAHEKSVESVRDRLPQLKHVWRIEAGAVETLGAAGTDVAEATVDERSAWAKADS
PATIVYTSGTTGRPKGCVLTHRAFFAECGNVVERLKPLFRTGDSSILLFLPLAHVFGRLV
EVAAVMAPIKLGHVSDTKNLTDELAAFRPTLLLGVPRVFEKVYNSARAKAQAGGKGKIFD
KATDVAIEYSRALDSASGPALGLKFKHKVFDRLVYSKLRAVLGGRAEYSISGGAPLGERL
GHFYRGIGFTVLEGYGLTESCAATAFNPWDRTKIGTVGQPLPGSTVRIADDGEVLLHGEH
LFSGYWNNEAATAEAVTDGWFHTGDIGTLDEDGYITITGRKKEIIVTAGGKNVAPAVIED
RIRAHALVAECMVVGDGKPFIGALVTLDEEFLPRWAEQHGKSGRGVAELREDPELLAEVQ
SAVDDGNAAVSKAEAVKKFRVLATQFTEESGHVTPSLKLKRNVVLRDFADEIAAIYGS
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgagttcagccttccggctctctacgaggtccccgcggacgggaacctgactgat
ctcatccgccgcaacgccgcgcagcatcccgacgtttccgtcatcgcccggaagaccgcg
gccggcgactgggcggacgtcaccgccaccgccttcctcgccgaggtccgtgccgccgcc
aggggcctgatcgcctcgggcgtgcagcccggcgaccgggtggccctgatctcccgcacc
cggtacgagtggaccctcttcgacttcgccgtctggaccgcgggcgcggtcaccgtgccg
gtctacgagacctcctcggccgagcagatcgagtggatcctcggtgactccggcgccgtc
gcggccgtcgtggagaccgaggcccacgagaagtccgtggagtcggtgcgcgaccgcctg
ccgcagctcaagcacgtgtggcggatcgaggcgggcgcggtcgagaccctcggcgcggcc
ggcacggacgtcgccgaggcgacggtggacgagcgcagcgcctgggccaaggcggactcc
ccggccaccatcgtctacacctcgggcaccaccggccgtcccaagggctgcgtgctcacg
caccgcgcgttcttcgccgagtgcggcaacgtcgtggagcgcctgaagccgctcttccgc
accggtgactcctcgatcctgctcttcctgccgctcgcgcacgtcttcggccggctggtc
gaggtcgccgccgtcatggcgccgatcaagctcgggcacgtcagcgacaccaagaacctc
accgacgaactggccgccttccggccgacgctgctgctgggcgtaccgcgcgtgttcgag
aaggtctacaactccgcgcgcgccaaggcccaggccggcggcaaggggaagatcttcgac
aaggccaccgacgtggcgatcgagtacagccgcgcgctggactcggcgagcggccccgcg
ctcggcctgaagttcaagcacaaggtcttcgaccggctggtctacagcaagctgcgcgcc
gtgctcggcggccgcgccgagtactcgatctccggcggggcgccgctgggcgagcggctg
ggccacttctaccgcggcatcggcttcacggtgctggagggctacggcctgacggagtcc
tgtgcggccaccgccttcaacccctgggaccgcaccaagatcggcaccgtcggccagccg
ctgcccggctccacggtccgcatcgccgacgacggcgaggtcctgctccacggcgagcac
ctgttctcggggtactggaacaacgaggcggccaccgccgaggccgtcaccgacggctgg
ttccacaccggcgacatcgggacgctggacgaggacggctacatcaccatcaccggccgc
aagaaggagatcatcgtcaccgcgggcggcaagaacgtcgccccggcggtgatcgaggac
cggatccgcgcccacgcgctggtcgccgagtgcatggtggtcggcgacggcaagcccttc
atcggcgcgctggtcaccctggacgaggagttcctgccccgctgggccgagcagcacggc
aagtccggccgcggcgtggcggaactgcgcgaggaccccgagttgctggccgaggtgcag
tcggcggtcgacgacggcaacgccgcggtgtccaaggcggaggcggtgaagaagttccgc
gtcctggcgacccagttcacggaggagtccggtcacgtgacgccctcgctgaagctgaag
cgcaatgtggtgctgcgggacttcgcggacgagatcgccgcgatctacggctcgtga
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