Actinacidiphila glaucinigra: OIE69_30140
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Entry
OIE69_30140 CDS
T09685
Name
(GenBank) DEDDh family exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
agla
Actinacidiphila glaucinigra
Pathway
agla03030
DNA replication
agla03430
Mismatch repair
agla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OIE69_30140
03430 Mismatch repair
OIE69_30140
03440 Homologous recombination
OIE69_30140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agla03032
]
OIE69_30140
03400 DNA repair and recombination proteins [BR:
agla03400
]
OIE69_30140
Enzymes [BR:
agla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OIE69_30140
DNA replication proteins [BR:
agla03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OIE69_30140
DNA repair and recombination proteins [BR:
agla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OIE69_30140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
HisKA_3
DNA_pol_A_exo1
PTCB-BRCT
RhoGAP
Motif
Other DBs
NCBI-ProteinID:
WSD62852
LinkDB
All DBs
Position
complement(6695163..6696149)
Genome browser
AA seq
328 aa
AA seq
DB search
MHAPQLPQPSWPEAYPDGYAVVDVETTGLGRDDRIVSAAVYRLDAHGEVQDHWYTPVNPQ
RDPGPVWIHGLTSDMLADAPLFGEVAAELADRLSGRVFVAHNAVFDWSMLAREFARAGTV
APVEHRLCTIVLSKALALPLANHKLESLAAHFGVVQQRAHHALDDARVLAEVFRPSLRQA
AAGGLRLPLHACRPLTEWIDTAVPAQSASAGYRSTYRPMSWRPARRRPACPYPNPGRLES
GGPLVQGMRVAFSGDTSIDRELLEDRATEAGLHVSSSVSRLTSLLVTNDPGSLTTKTVRA
RQLGTPVVGERRFADLLGDVAPAPDVHG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcgccccagcttccgcaaccgtcgtggccagaggcctaccccgacggatacgcc
gtcgtggacgtcgagaccaccggcctcggccgcgacgaccggatagtgtccgcggccgtc
taccggctggacgcgcacggcgaggtgcaggaccactggtacacccccgtcaacccgcag
cgggacccgggcccggtgtggatccacggcctcacctcggacatgctggccgacgccccg
ctcttcggcgaggtcgccgccgagctggcggatcggctgtcgggccgggtgttcgtcgcc
cacaacgcggtcttcgactggtccatgctggcccgggagttcgcgcgggcgggcaccgtg
gcgcccgtggagcaccgactgtgcaccatcgtgctctccaaggcgctggcgctgccgctg
gccaaccacaagctggagtccctggccgcgcacttcggcgtggtccagcaacgcgcccac
cacgccctggacgacgcccgcgtgctggcggaggtgttccgccccagcctgcggcaggcc
gcggcgggcggactccggctgccgctgcacgcctgccgtccgctgacggagtggatcgac
acggccgtccccgcgcagtcggcctccgcgggataccgcagcacctaccggccgatgagc
tggcggcccgcgcggaggcggccggcctgcccctaccccaacccggggcggctggagtcc
gggggaccactggtccagggaatgcgggtcgccttttcgggcgacacgagcatcgaccgc
gaactgctggaggaccgcgccaccgaggcgggtctgcacgtgtcgtcctcggtgagccgg
ctgaccagcctgctggtgaccaacgacccgggctcgctcaccacgaagaccgtacgggcc
cggcagctcggcaccccggtggtcggcgagcgccgcttcgccgatctgctgggcgacgtc
gcccccgcgccggacgtgcacggctga
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