Alnus glutinosa (common alder): 133851110
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Entry
133851110 CDS
T10577
Name
(RefSeq) uncharacterized protein LOC133851110 isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aglu03009
]
133851110
Ribosome biogenesis [BR:
aglu03009
]
Eukaryotic type
90S particles
Other 90S particles
133851110
Pre-60S particles
Other pre-60S particles
133851110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
ARM_TBCD
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
133851110
NCBI-ProteinID:
XP_062143407
LinkDB
All DBs
Position
12:7430096..7446280
Genome browser
AA seq
1264 aa
AA seq
DB search
MEDMDGTSDELCNSILSRFGNSTNEDHQHLCTVIGAMSQEFKDQNLPSTPVAYFGAACSS
LDRLASEPQQPVHVVQSLLSILHIVLPRIPLAILHKKAEFLSDLLLRVLRSPLLLVDATT
FGLKCVSHLLIIRDAPDWSEVSCLYDVLLGFLTDSRPKVRRQSHLCLRDSLSRFQEASAL
ASASEGIVKIFERSLLLAGGSKTNATEGSKGAQEVLYVLDALKECLPLISMKYRTSVLKR
FKTLMELHQPLVTRRIADSLYFLLLVPDLDVSPEALCDLISSIALSVSTNETSVDAMTFA
ARLLDVGMSKMYSLNRELCVTKLPVVFNAFKDILASEHEEAIYAAMNALKSLINACIDEK
LIKQGPHNDARRFEPTIIEKLCITIESLLDYHYAAVWDIAFQVVSTLFDKLGHYSSYLLR
GILSSLADMQKLPDEDFPFRKQLHECLGSALGALGPETFLGLLPLNLEAEDLSEANVWLF
PILKHYTIGAHLSFFTDSVLGMIGLLKQKSRKLELQGRAISSRTADAFVYSLWSLLPSFC
NYPFDMAESFKDLKKALCSALHEEPDTRGVICSSLQILIQQNKKILEEKSEMPDTEEGIA
RQRAVARYTPQVAAKNMSVLKSSAHELLNVLSGVLLQSKTDDGGSLQSTICELASISEKK
VVSSFFSDTMQKLLKVTQEARKPENSRNSNSRQIDHASDESSPSLLRARLLDLAVSLLPG
LNAKEIDVLFVAIKPALQDVEGLIQKKAYKVLSVVLKVFLFNCDWFLSAKLEELLGLMIE
VLPSCHFSAKRHRLDCLYFLVVYVAKDNSEQRRRDIISSFLTEIMLALKEANKKTRNRAY
DILVQIGHACGDEEKGGNRENLFQFFNMVAGGLAGETPHMVSAAVKGLARLAYEFPNLVS
TACNLLPSTFLLLQRKNKEIIKANLGLLKVLVAKSQPEGLQMHLTSMVEGLLKWQDNTKN
HFKAKVKHLLEILVKKCGLEAVKAVMPEEHMKLLTNIRKLKERKEKKLRAKSEARSQLSK
ATTSRLSKWNDTKIFSDFGDDESEGSDAEYMDARTMSGRRSKGSSQLKSKASLLRSKSRA
AKNLPEHLFDQLEDEPLDLLDRQKTILSLRSKHLKRKVDLDEPELDSEGRLIIRDGEEPK
KEIPSDPDLDAKSEAGSHLSVNSRRNQKRRKTSDSGGWAYTGSEYSSKKAGGDVKRKDKL
EPYAYWPLDRKMMSRRPEHRAAARKGMASVVKMTKKLEGKSASIALSSKGLKFKRSQKKK
GSKK
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggaagacatggacggaacctctgacgagctctgcaattcgatcctctctcgttttgga
aactccacgaacgaggaccaccagcacctctgcacagtcataggcgccatgtcccaggag
ttcaaggaccagaacctcccttccacaccggtcgcctacttcggcgccgcctgctcttcc
ctcgaccgcctcgcctccgagccccaacagcctgtccacgttgtccaatccctcctcagc
atcctacacatcgtccttcccagaatacccctagcaattcttcacaagaaggccgagttc
ttgtccgacctattgcttcgggttctgcggtctccgttgctattggtcgatgctacaaca
tttggattgaaatgcgtttcccatttgttgatcatccgagatgctcccgactggtctgag
gtgtcttgcttgtacgatgttctattggggttcctcacggactcgcgtcctaaggtaaga
aggcaatcgcatttgtgtcttcgagattccttatcaagatttcaggaagcatcagcgctg
gcatctgcaagtgaagggattgtgaagatatttgaaaggtctcttttgcttgcaggtgga
tcaaaaacgaatgccactgaaggatccaaaggagctcaggaggtcctttatgttttggat
gctttgaaagagtgtcttccccttatatcaatgaagtatagaacgagcgtcctcaagcgc
ttcaaaactctaatggaattgcaccaaccccttgtcacaaggcgcatagcagatagtttg
tattttcttcttcttgtcccagatctagatgtttctcctgaggcattgtgcgatttgata
agctcaatagctttgtctgtctccacgaatgagacatctgtggatgctatgacattcgct
gctcgcctgcttgatgttggaatgagtaaaatgtattcacttaatagggaattatgcgta
acaaagctccctgttgtattcaatgcattcaaagatattttggcatctgaacatgaggag
gccatatatgcagccatgaatgcattgaagagtctgataaatgcttgcattgatgaaaaa
ttgatcaaacagggtccacacaatgatgcaaggaggtttgagcctactatcattgaaaaa
ttatgtataactatcgaaagcttacttgattatcactatgctgctgtttgggacatagca
tttcaagttgtttcaacattgtttgataaattagggcattattcttcttatcttttgagg
gggatccttagcagcttggctgacatgcagaagttgcctgatgaagattttcctttcagg
aaacagctacatgaatgccttggatcagcccttggtgcattgggacctgaaacttttttg
ggccttctacctcttaatttagaggctgaagacctatctgaggcaaatgtttggcttttt
ccaattctgaagcattatacgataggtgcccatttaagcttcttcacagattcagttttg
ggtatgattggactgttgaagcagaaatctcgaaagcttgagttacaaggacgggccatt
tcatcaagaactgcagatgcgtttgtgtactctttgtggtctttattgccttcattttgc
aactatcctttcgatatggctgaaagtttcaaggatctaaaaaaagctttatgtagtgcc
cttcatgaagaacctgatactcgtggagtaatatgctccagtttgcagattcttattcaa
cagaataagaaaattttggaagagaaaagtgagatgcctgatactgaagaaggcattgcc
agacagcgagcagtggcccgttacaccccacaggttgcagcaaaaaatatgagtgtgctt
aagtcatctgcccacgagttattaaatgttttgtcaggtgtcctcctgcaatctaaaaca
gatgatggcggttctttacagtccacaatctgtgaacttgcttcaatatcagagaaaaaa
gtagtatcgagcttcttctctgatacaatgcagaagcttttgaaggttactcaggaggcc
agaaaaccagaaaattcaagaaattctaattctaggcagattgaccatgcctcagatgaa
agttcaccgtcacttttgagggcacggctattggatttggcagtttcacttttacctggt
ttgaacgctaaagagattgatgttttatttgtcgcaataaagcctgcattacaggatgtt
gaaggtctgatacaaaagaaggcgtacaaagttctttcagttgttctcaaggtatttttg
tttaactgtgattggtttctttcagcaaagctcgaggaattgctcgggcttatgattgaa
gtgctaccttcatgccatttttccgccaaacgtcacagacttgattgcctgtactttcta
gtagtatatgttgccaaggataattcagagcagaggcgacgtgacatcattagttctttc
ctaacagaaataatgcttgcacttaaagaggcaaataaaaaaacaagaaacagagcatat
gatattcttgtccaaattggccatgcatgtggggatgaagagaaaggcggaaatagagaa
aacttgtttcaatttttcaacatggtagccggaggactagctggtgagacacctcacatg
gtcagtgctgcagtcaaaggcttagctcgcttggcttacgagtttccaaatcttgtttca
actgcgtgcaatttacttccatccacgtttctcctcctccagagaaagaataaagaaatt
atcaaggctaatttaggtttgttaaaggtgttggtggcaaaatcacagcctgaagggttg
caaatgcatttgacgagcatggtggaaggcttgctgaagtggcaagataacaccaaaaac
cactttaaagccaaggttaagcatctcctggaaattcttgtcaagaagtgcggtctggag
gcagttaaggctgtgatgcccgaggaacacatgaaactccttactaatatacgaaagctc
aaggaacggaaagagaagaagctaagagctaaatcagaagcaagatctcaactgtcaaaa
gcaaccacatccaggctaagcaaatggaatgatacaaaaatattttctgattttggcgat
gatgaaagcgagggaagtgatgctgagtacatggatgccaggacaatgtctggtcgacgg
agcaagggttcctcacagctaaagtccaaagcatccttattgcgctccaagagtagagca
gctaagaacttgcccgagcacttgttcgaccaattagaagatgagccacttgacttgctt
gataggcaaaaaacaatattatctcttcgatctaagcatctaaagcggaaagtagatttg
gatgagccagaactggactctgaagggcgtttgattattcgtgatggagaagaaccaaag
aaggaaataccatctgaccctgatttggatgcaaagagtgaagcaggtagtcacttgtca
gtgaactcgaggagaaaccagaagcgcaggaaaacatcagactctggcggttgggcttac
acaggtagcgagtactctagcaagaaggcagggggggatgtgaaaaggaaggataagctt
gaaccatatgcatattggccacttgatcgcaaaatgatgagccgtagacctgagcatcgg
gctgctgcaaggaaagggatggcaagcgtggtaaagatgacaaaaaagcttgaagggaag
agtgcctcaattgcactctccagtaaaggcttgaagtttaaaaggagtcaaaagaagaag
ggcagcaagaaatga
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