Alnus glutinosa (common alder): 133851210
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Entry
133851210 CDS
T10577
Name
(RefSeq) uncharacterized protein LOC133851210
KO
K14794
ribosomal RNA-processing protein 12
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aglu03009
]
133851210
Ribosome biogenesis [BR:
aglu03009
]
Eukaryotic type
90S particles
Other 90S particles
133851210
Pre-60S particles
Other pre-60S particles
133851210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
ARM_TBCD
MMS19_N
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
133851210
NCBI-ProteinID:
XP_062143523
LinkDB
All DBs
Position
12:7414821..7426361
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AA seq
1270 aa
AA seq
DB search
MEDMDGTSDELCNSILSRFGNSTNEDHQHLCTVIGAMSQEFKDQNLPSTPVAYFGAACSS
LDRLASEPQQPVHVVQSILSILHIVLPRIPLAILHKKAEFLSDLLLRVLRSPLLLVDATT
FGLKCVSHLLIIRDAPDWSEVSCLYDVLLGFLTDSRPKVRRQSHLCLRDSLSRFQEASAL
ASASEGIVKIFERSLLLAGGSKTNATEGSKGAQEVLYVLDALKECLPLISMKYRTSVLKR
FKTLMELHQPLVTRRIADSLYFLLLVPDLDVSPEALCDLISSIALSVSTNETSVDAMTFA
ARLLDVGMSKMYSLNRELCVTKLPVVFNAFKDILASEHEEAIYAAMNALKSLINACIDEK
LIKEGVDQIIMMNPHNDARRFGPTIIERICVTIKSLLDYHYAAVWDMVFQVVSTIFDKLG
HSSSYLLGGILSSLADMQKLPDEDFPFRKQLHECLGSALGALGPETFLGLLPLNLEAEDL
SEANVWLFPILKQYTIGAHLSFFTDSVLGMIRLMKQKSRKLELQGRVISSRTTDAFVYSL
WSLLPSFCNYPFDMAESFKDLEKALCSALHEEPDTRGVICSSLQILIQQNKKILEEKSEM
PDTEEGIARQRAVARYTPQVAADNMSVLKSSARELLNVLSGVLIQSKTDDGGSLQSTICE
LASISEEVVPKFFNIRIKKPLKVIQEARKPENSRNSISRQIDHASNESSPSLLRARILDL
AVSLLPGLNTKKNEEIDDLFVTIKPALQDVEGLIQKKAYKVLSAILKNCDGFLSGKLEEL
LGLMIEVLPSCHFSAKRHRLDCLYFLIVHIAKDNSEQRRRDIISSFLTEIMLALKEANKK
TRNRAYDILVQIGHACGDEEKGGNRENLFQFFNMVAGGLAGETPHMVSAAVKGLARLAYE
FPNLVSTACNLLPSTFLLLQRKNKEIIKANLGLLKVLVAKSQPEGLQMHLTSMVEGLLKW
QDNTKNHFKAKVKHLLEILVKKCGLEAVKAVMPEEHMKLLTNIRKLKERKEKKLKAKSEA
RSQLSKATTSRLSKWNDTKIFSDFGDDESEGSDAEYMDARTMSGRRSKGSSHLKSKASLL
RSKSEAAKNLPEHLFDQLEDEPLDLLDRQKTMLSLRSKHLKRKVDLDEPELDSEGRLIIR
DGEEPKKETPSDPDLDAKSEAGSHLSVNSRRNQKRRKLADSGGWAYTGSEYSSKKAGGDV
KRKDKLEPYAYWPLDRKMMSRRPEHRAAARKGMAGVVKMTKKLEGKSASIALSSKGLKFK
RSKKKKGSKK
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atggaagacatggacggaacctctgacgagctctgcaattcgatcctctctcgttttgga
aactccacgaacgaggaccaccagcacctctgcacagtcataggcgccatgtcccaggag
ttcaaggaccagaacctcccttccacaccggtcgcctacttcggcgccgcctgctcttcc
ctcgaccgcctcgcctccgagccccaacagcctgtccacgttgtccaatccatcctcagc
atcctacacatcgtccttcccagaatacccctagcaattcttcacaagaaggccgagttc
ttgtccgacctattgcttcgggttctgcggtctccgttgctattggtcgatgctacaaca
tttggattgaaatgcgtttcccatttgttgatcatccgagatgctcccgactggtctgag
gtgtcttgcttgtacgatgttctattggggttcctcacggactcgcgtcctaaggtaaga
aggcaatcgcatttgtgtcttcgagattccttatcaagatttcaggaagcatcagcgctg
gcatctgcaagtgaagggattgtgaagatatttgaaaggtctcttttgcttgcaggtgga
tcaaaaacgaatgccactgaaggatccaaaggagctcaggaggtcctttatgttttggat
gctttgaaagagtgtcttccccttatatcaatgaagtatagaacgagcgtcctcaagcgc
ttcaaaactctaatggaattgcaccaaccccttgtcacaaggcgcatagcagatagtttg
tattttcttcttcttgtcccagatctagatgtttctcctgaggcattgtgcgatttgata
agctcaatagctttgtctgtctccacgaatgagacatctgtggatgctatgacattcgct
gctcgcctgcttgatgttggaatgagtaaaatgtattcacttaatagggaattatgcgta
acaaagctccctgttgtattcaatgcattcaaagatattttggcatctgaacatgaggag
gccatatatgcagccatgaatgcattgaagagtctgataaatgcttgcatagatgaaaaa
ttgatcaaagagggtgttgatcagattattatgatgaatccacacaatgatgcaaggagg
tttgggcctactatcattgaaagaatatgtgtaactatcaaaagcttacttgattatcat
tatgctgctgtctgggacatggtatttcaagttgtttcaacaatttttgataaattaggg
cattcttcgtcttatcttttgggggggatccttagcagtttggctgacatgcagaagttg
cctgatgaagattttcctttcaggaaacagctgcatgaatgccttggatcagctcttggt
gcattgggacctgaaacttttttgggccttttacctcttaatttagaggctgaagaccta
tctgaggcaaatgtttggctctttccaattctgaagcagtatacgataggtgcccattta
agcttcttcacagattcagttttgggtatgattagactgatgaagcagaaatctcgtaag
cttgagttacaaggacgggtcatttcatcaagaactacagatgcgtttgtgtactctttg
tggtctttattgccttcattttgcaactatcctttcgatatggctgaaagtttcaaggat
ctagaaaaagctttatgtagtgcccttcatgaagaacctgatactcgtggagtaatatgc
tccagtttgcagattcttattcaacagaataagaaaattttggaagagaaaagtgagatg
cctgatactgaagaaggtattgccagacagcgagcagtggcccgttacaccccacaggtt
gcagcagataatatgagtgtgcttaagtcatctgcccgtgagttattaaacgttttgtcg
ggtgtcctcatccaatctaaaacagatgatggtggttctttacagtccacaatctgtgaa
cttgcttcaatatcagaggaagtagtaccaaagttcttcaacattagaattaagaagcct
ttgaaggttattcaagaggccagaaaaccagaaaattcaagaaattctatctctaggcag
attgaccatgcctcaaatgaaagttcaccatcacttttgagggcacggatattggatttg
gcagtttcacttttacctggtttgaacactaaaaagaatgaagagattgatgatttattt
gtcacaataaagcctgcattacaggatgttgaaggtctgatacaaaagaaggcatacaaa
gttctttcagctattctcaagaactgtgatggctttctttcaggaaagctcgaggaattg
ctcgggcttatgattgaagtgctaccttcatgccatttttccgccaaacgtcatagactt
gattgcctgtactttctaatagtacacattgccaaggataattcagagcagaggcgacgt
gacatcattagttctttcctaacagaaataatgcttgcacttaaagaggcaaataaaaaa
acaagaaacagagcatatgatattcttgtccaaattggccatgcatgtggggatgaagag
aaaggcggaaatagagaaaacttgtttcaattttttaacatggtagccggaggactagct
ggtgagacacctcacatggtcagtgctgcagtcaaaggcttagctcgcttggcctacgag
tttccaaatcttgtttcaactgcgtgcaatttacttccatctacgtttctcctcctccag
agaaagaataaagaaattatcaaggctaatttaggtttgttaaaggtgttggtggcaaaa
tcacagcctgaagggttgcaaatgcatttgacgagcatggtggaaggcttgctgaagtgg
caagataacaccaaaaaccactttaaagccaaggttaagcatctcctggaaattcttgtc
aagaagtgcggtctggaggcagttaaggctgtgatgcccgaggaacacatgaaactcctt
actaatatacgaaagctcaaggaacggaaagagaagaagctaaaagctaaatcagaagca
agatctcaactgtcaaaagcaactacatccaggctaagcaaatggaatgatacaaaaata
ttttctgattttggtgatgatgaaagcgagggaagtgatgctgagtacatggatgccagg
acaatgtctggtcgacggagcaagggttcctcacatctaaagtccaaagcatccttattg
cgctccaagagcgaagcagctaagaacttgcccgagcacttgttcgaccaattagaagat
gagccacttgacttgcttgataggcaaaaaacaatgttatctcttcgatctaagcatcta
aagcggaaagtagatttggatgaaccagaactggactctgaagggcgcttgattattcgt
gatggagaagaaccaaagaaggaaacaccctctgaccctgatttggatgcaaagagtgaa
gcaggtagtcacttgtcagtgaactcaaggagaaaccagaagcgcaggaaattagcagac
tctggcggttgggcttacacaggtagcgagtactctagcaagaaggcagggggggatgtg
aaaaggaaagataagcttgaaccatatgcatattggccacttgatcgcaaaatgatgagc
cgtagacctgagcatcgggctgctgcaaggaaagggatggcaggcgtggtaaagatgaca
aaaaagcttgaagggaagagtgcctcaattgcactctccagtaagggcttgaagtttaaa
aggagtaaaaagaagaagggcagcaagaaatga
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