Alnus glutinosa (common alder): 133851213 Help Entry 133851213         CDS       T10577                                  Name (RefSeq) DNA mismatch repair protein MSH6   KO K08737   DNA mismatch repair protein MSH6 Organism aglu  Alnus glutinosa (common alder) Pathway aglu03430   Mismatch repair Brite KEGG Orthology (KO) [BR:aglu00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     133851213  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:aglu03400]     133851213 DNA repair and recombination proteins [BR:aglu03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      133851213 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_IV MutS_II PTM_DIR17_Tudor LBR_tudor NdhM Motif Other DBs NCBI-GeneID:  133851213 NCBI-ProteinID:  XP_062143527 LinkDB All DBs Position 12:1854814..1866552 Genome browser AA seq 1330 aa AA seqDB search MAPARRQSSGRSPLVNPQRQITSFFSKTTSSPSPILPKQSPKTVSDSVPKNPKCNPNPSP SSSPGPTTPSPLQSKSKKPLLVIGSSPSTPDEKRSYGEDSVGRRVKIFWPLDKVWYEGSV KSFDKDANKHLVQYDDAEEELLDLEKEKIEWVDKSGKKKLKRLRRGSSDSKDGEEVEIVK EEECVEEFRRPRRRGGKVVVEDEEVESDGGGVDGHDDSSDEDWGKNVEEEVVEDGEDDMD LEEEEDEGVKASKGKRDGLKKRKVSEGEKLGSAKKSKNGSGGGGGGVGKGGLKVSSVEPA GNGGKASNDLGNALMGDASERFGMREALKFRFLGEERRDAKRRRPGEANYDPRTLYLPPD FLKSLSGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHIGSKELDLQYMKGEQPHCGF PEKNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVSKGTLTE GEMLSANPDASYVMAVAEGCKRLVNQKADRIFGVCVVDVATSRVILGQFGDDTECTALCC LLSELRPVEIVKPAKQLSPETERVLLRHTRNPLVNELVPLLEFWEAEKTVHEVKSIYSHI VQDSVSGSLNEANLHCINSHIEENGLGYLPDVLSELVKAGENGSFALSALGGTLFYLKQA FLDETLLRFAKFELLPCSGFGNIVSKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNH CVTAFGKRLLKTWLARPLYHPESIRERQDAVSGLRGANLAFALEFRKALSRLPDMERLLA RVFAISEANGRNANKVILYEDAAKKQLQEFISALRGCELTAQACSSLGVILESVESRVLH HLLTPGNGFPDINSVINHFKGAFDWVEANNSGRIIPHEGVDAEYDSSCKKVKEVEFSLTK HLKEQRKLLGDASITYVTVGKEAYLLEVPESLRGSIPRDYELRSSKKGFFRYWTPNIKKL VGELSQAESEKESSLKSILQRLIGHFCEHHDKWRQLVSATAELDVLISLAIASDYYEGPT CRPSILGSSNPDEVPCLSAKNLGHPVLRSDSLGKGTFVPNDVSIGGSDHASFILLTGPNM GGKSTLLRQVCLAVILAQVGADVPAESFELSSVDRIFVRMGAKDHIMAGQSTFLTELSET ALMLSSATRNSLVALDELGRGTSTSDGQAIAESVLQHFVHKVQCRGMFSTHYHRLAVDYQ KDPKVSLCHMACRVGNRVGDVEEVTFLYRLTPGECPKSYGVNVAWLAGLPDSVLQNAAAK SREFEGAYGKHWKKFEDGLSNQSLVDEMVEFVQKFMDIAANLSWHKSPESIGTSSLTELQ HRAQILLQKI NT seq 3993 nt NT seq  +upstreamnt  +downstreamnt atggcaccggcacggcgccagagcagtggccgatcgccactcgtcaatccgcagcgccaa attacttctttcttctccaaaacgacgtcgtctccttctccgattctccccaagcaaagc cctaaaactgtttccgattccgtccctaaaaaccctaaatgcaatcccaatcctagtcca agctcgagccctggccccaccaccccttcccctctccaatccaagtccaagaagcccctc ttggtcatcggctcatctccgtcgactcccgacgagaagagatcctacggcgaggatagt gtgggaaggagggtcaagatcttttggccgttggataaggtctggtacgaaggttctgtg aaatccttcgacaaggatgctaacaagcatttggttcagtacgatgacgccgaggaggag ttgttggatttagagaaggagaagattgaatgggtcgacaagagcgggaagaagaaattg aagcggttgcgaaggggttcttcggattctaaggacggcgaggaggtagagatcgttaag gaggaggagtgtgttgaggagttcaggcggccgcggcggagaggtgggaaggttgtggtt gaggacgaggaggtggagagtgatggtggtggcgttgatggtcatgatgattctagcgat gaggattgggggaagaatgtggaggaagaggtggttgaggatggtgaggatgatatggat ttggaggaggaggaggatgaaggagtgaaggcctcgaaaggaaagcgcgatggcttgaag aagcggaaggtgagcgagggagaaaaattgggttctgctaagaagagcaagaatggtagt ggcggtggtggtgggggtgtgggtaagggaggtttgaaggtttcttcggtggagcctgct ggtaatggtgggaaggcatctaacgaccttggtaatgccctaatgggtgatgcttcagaa aggtttggtatgcgtgaagctctaaagtttcgcttccttggggaagaacgcagggatgca aaaagaagacgtcctggggaagcaaattatgatccgaggacactttacttgcctcctgat tttctaaagagtttatcaggtggtcagagacaatggtgggagtttaagtcaaagcatatg gacaaggttttgtttttcaagatgggcaaattttatgaactttttgaaatggatgcacat attggatcaaaagagcttgacttgcaatatatgaagggagaacaaccacattgtggattc ccagaaaagaacttctcaatgaatgtggaaaaattggctagaaagggttatcgagttctt gttgtagagcagacagaaacccctgaacagctagagcttcgtcgcaaagagaaaggttcc aaggataaggttgtgaaacgtgaaatatgtgcggtggtttccaaaggaacactaactgag ggagagatgctgtcagcaaatcctgatgcttcttacgtaatggcagtagctgaaggctgt aagagattggtgaaccaaaaggcagaccgcatttttggtgtttgtgtagttgatgttgct accagcagggttattcttggtcagtttggggatgatacggagtgcactgccttgtgctgt ctcttgtctgagctaaggccggtggaaattgtaaaacctgccaaacagctcagccctgaa acagagagagtattgctgagacatacaagaaatcctttagtgaatgagttagttccactc ttggaattctgggaagcagagaaaactgtacatgaagtcaaaagcatctacagccatatt gttcaagattcagtttctggatctttaaatgaagcaaatttgcattgcattaattctcac attgaggaaaatgggctgggctacctaccagatgttctttcagagctagtgaaggcaggc gagaatggcagctttgcactttcagctcttgggggcacccttttctatcttaagcaggct ttcctggatgagacattacttcgttttgcaaagtttgagctacttccatgctctggtttc ggcaatattgtctcaaaaccatacatggttcttgatgcagctgccctggagaatcttgag atttttgagaatagcagaaatggagactcgtcagggacgctctattcccaattgaaccat tgtgtgacagcatttgggaagaggttgctgaaaacatggttggcaagacctttatatcat ccagagtcaattagggaacgccaggatgctgtttcaggtttacggggagctaatctagct tttgcacttgaatttcgaaaagcattgtccaggctccccgacatggagcggttgcttgca cgtgtttttgctatcagtgaagcaaatggaaggaatgccaacaaagtgattctatatgag gatgcagcaaaaaagcagctccaagagtttatctcagctctacgtggttgtgaattgacg gcccaagcatgttcttcgcttggtgttattttggaaagtgttgaatctagagtgcttcat catttgttaacacctggtaatggtttccctgatatcaattcagttataaatcatttcaag ggtgcctttgattgggtggaagccaataattctggacgtataatcccccatgaaggagtt gatgcagagtatgactcttcctgtaaaaaagttaaggaggttgaatttagtttaacaaaa cacctcaaggaacagcgtaaactacttggagatgcatctattacatatgtcacagttgga aaagaggcatacctcttagaagtaccagaaagtttgcgtgggagcattcctcgtgattat gagttacgatcatctaaaaagggcttcttcaggtattggactccaaatatcaagaagttg gtgggagagctctcgcaagctgaatctgaaaaggaatcctcactgaaaagcattttgcag aggttaattggacatttctgtgaacatcatgataagtggagacagttggtttctgctact gcagagctggatgttttgatcagtctagcaattgcaagtgactattatgaagggccaaca tgccggccaagtatattaggctcatcaaatccagatgaagttccatgcctttccgcgaaa aatttgggacatcctgttcttagaagtgattctttaggcaagggtacatttgtccccaac gacgtttcgattggcggttctgatcatgccagtttcatccttctcactggtcctaacatg ggtggaaaatcaactcttcttcgccaagtttgcttggctgtaattttggcccaggtagga gcggatgttcctgcagaaagctttgagctgtcatctgtggaccgaatatttgttcgaatg ggtgccaaagatcatataatggcaggccaaagtacatttttaacagaactttcagaaact gcattaatgctgtcttcagcaacacgtaattcactagtggcactggatgaacttggacgt gggacatcaacttcagatggacaagccattgctgaatcagttcttcaacattttgtccac aaggtgcagtgtcgaggaatgttttctactcactatcaccgattagctgtagactatcag aaagatcccaaggtttcactctgccatatggcatgccgagttggaaatagagttggagat gtggaagaagttacatttctttacaggttgacacccggtgaatgccctaaaagctatggt gtcaatgttgcgtggttagctggacttcctgattccgtacttcaaaatgctgccgctaag tcgagagaatttgagggtgcatatggtaaacactggaagaaatttgaagatggcttgtct aatcaaagtttggttgacgaaatggtagaatttgtccaaaagtttatggatattgcagca aatttgagttggcacaagtctcctgagagcattggcactagctccctgactgaacttcaa catagagcacaaatactcctacagaaaatttga

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