Alnus glutinosa (common alder): 133851247
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Entry
133851247 CDS
T10577
Name
(RefSeq) protein HASTY 1 isoform X1
KO
K14289
exportin-5
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133851247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aglu03016
]
133851247
03036 Chromosome and associated proteins [BR:
aglu03036
]
133851247
Transfer RNA biogenesis [BR:
aglu03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
133851247
Chromosome and associated proteins [BR:
aglu03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
133851247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
Motif
Other DBs
NCBI-GeneID:
133851247
NCBI-ProteinID:
XP_062143561
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Position
12:19496187..19524869
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AA seq
1209 aa
AA seq
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MEDSSTNTANNVARAIAAALDWTSTPDARKAAVSFLESIKTGDVRVLASTSFLLVRKDWS
SEIRLHAFKMLQHLVRLRWEELSSTERRNFANVAVDLMSEIANPCEEWALKSQTAALVAE
IVRREGLVLWQDLLPSLLSLSSKGPAQAELVSMMLRWLPEDIMVHNEDLEGDRRRLLLRG
LTQSLPEILPLLFKLLERHFVAAVSAAGNQEMDVAKQHAATIITTLNAVNAYAEWAPLPD
LAKYGIIHGCGFLLSSPDFRLHACEFFKLVSPRKRPIDDSASEFNSAMGNIFQILMNVSR
EFLHRSSSSAGVIDESELEFAEYVCESMVSLGSSNLQSMAGDSTLLPLYLQQMLGFFQHF
KLALHFQSLLFWLALMRDLMSKPKVVAHSAGDSSAVNSLSTGSGQADSEKRKILGFVNDD
ICSAILDISFQRMLKREKVLPGTEHTLGALELWSDDFEGRGDFGQYRSRLSELIRFVASY
KPLIASAKVSERIITIIKYLLLSQMPAQDLAVMESMQLALENVVNAVFDGSNEFGGGSSE
VHLALCRIFEGLLQQLLALKWTEPALVQALGHYLDALGPFLKYFPDAVGGVINKLFELLN
SLPFVIKDPSTSSARHARLQICTSFIRIAKAAGKSILPHMKGIADTMAYMQREGCLLRGE
HNLLGEAFLVMASAAGIQQQQEVLAWLLEPLSQQWTQLEWQNNYLSEPLGLVRLCSETPT
MWSIFHTLTFFEKALKRSGFRKAQLNLQNNLTSSSTPLHPMATHLSWMLPPLLKLLRAIH
SLWSPSISQILPGEVKASMTITDAELFSLLGEGNPKLSKGALTFTDGSHVDMGKEGNAEP
NESDIRNWLKGIRDSGYNVLGLSTTIGDSFFKGLDIHSFALALVENIQSMEFRHIRQLVH
SVLIPLVKYCPSDMWDIWLEKLLHPLFLYSQQALSCSWSSLLHEGRAKVPDIHGIVAGSD
LKVEVMEEKLLRDLTREICLLLSAIAWPPLNTGLPSLEQSGHIIRVDMSSLKDLDAFASS
SMVGFLLMRKGLALPALQICLEAFTWTDGEAVTKVSSFCAAVVVLSVTTNNVELREFVSR
DLFSAIIQALALESNAITSADLVALCREIFVFLCDRDPAPRQVLLSLPCIKPHDLVAFEE
ALMKTSSPKEQKQHMKSLLLLATGNKLKALAAQKSVNVITNVSLRARNLVNAPETRSDDG
DTLGLAAIL
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atggaggacagtagcaccaatacagccaacaatgtggcccgagccatagctgcagccctc
gactggacctccactcccgacgctcgcaaagcagctgtttctttcttagaatctatcaaa
acaggagatgtacgggttttggcaagcacatccttccttctagtcagaaaggactggtct
tctgaaattcggttgcatgcctttaaaatgttgcagcatttggtacggctgcggtgggag
gaattaagctctacagaacgtaggaattttgcaaatgttgctgttgatttgatgtctgag
attgcaaatccttgtgaggaatgggctttgaaaagtcagacagctgctcttgttgctgag
atagttagaagagaaggcttagttctatggcaagatctgctcccgtctcttttatccctg
tccagcaagggtcctgcacaagctgagttggtttcgatgatgctgaggtggcttcctgaa
gatattatggttcacaatgaagatttggaaggtgatcgacgtaggctgttgttgcggggg
cttactcaatctttgcctgaaattttgcctttattattcaaattactagaaagacacttt
gtagctgcagtgagtgcagcaggtaatcaagaaatggatgttgcaaaacagcatgcagcc
acaataataactactttaaatgctgttaatgcatatgcagaatgggctccattgcctgat
cttgctaaatatggcataattcatgggtgtggtttcttactttcttctcctgactttcgt
cttcatgcttgtgagtttttcaaacttgtctcgccaaggaagagacctattgacgactct
gcttctgaattcaattctgcaatgggtaatatctttcagatcttgatgaatgtctctaga
gaatttttgcacagatcaagctctagtgctggagttattgatgaaagtgaattagagttt
gcggaatatgtatgtgagagtatggtgtctttgggttcttcgaacttgcagtctatggct
ggcgatagcacccttcttcccctttatttacaacagatgctggggttttttcaacacttt
aagctagctcttcattttcaatccctgctcttttggctggcactaatgagagacttgatg
tcaaagccaaaggttgttgcacattcagctggagacagttcggctgttaatagtctaagc
actggttctggacaggctgatagtgaaaagagaaagatcttaggttttgtgaatgatgat
atttgtagtgcaattctggatatatctttccagcgtatgctaaagagggaaaaggttctt
cctggaactgaacataccctgggggcattggagttgtggagtgatgattttgaaggcagg
ggtgattttggccagtatcgatcgaggctgtcagagttaatcaggtttgttgcttcttac
aagccccttatagccagtgctaaagtttctgaaagaattattacaatcatcaaatacctc
ttgctttctcaaatgcctgctcaggacttggctgtaatggaaagtatgcaattggcttta
gaaaatgttgtgaatgcagtttttgatggatcaaatgaatttggtgggggtagctctgaa
gtccatcttgcactgtgtagaatatttgaaggtttactccagcaacttcttgctttgaaa
tggaccgagccagcacttgtgcaagcacttgggcactacttagatgcattgggtcccttt
ctgaagtacttcccggatgcagttggtggtgtcatcaataagctatttgagctcctaaac
tcacttccttttgttattaaggatccttctacaagtagtgcacgacatgcaaggttgcag
atttgtacatcatttattagaatagccaaagctgctggcaaaagtattttgcctcatatg
aagggtatagctgacaccatggcatatatgcaaagagaaggttgtttgcttcggggtgaa
cataatcttctaggggaagcatttcttgtaatggcttctgctgctgggattcaacagcag
caagaagttttggcatggctgctagaacccttgagccaacaatggacacagcttgagtgg
caaaataattatttgtctgaaccactaggtctggttcgcttgtgctccgagacaccaacc
atgtggtcaattttccacacattgacattttttgagaaggcacttaagaggagtggattt
agaaaagcgcagttgaatttgcaaaacaacttgacatctagctctactcctttgcacccc
atggctactcatctgtcatggatgctgcctcctcttttaaaactgcttcgtgccatacat
tccctttggtctccatccatatctcaaatcttacctggagaggtgaaagcttcaatgacg
attaccgatgctgagttattcagtctcctaggggaagggaatcctaaattatcaaagggt
gcattaactttcacagatggatctcatgttgacatgggtaaggaaggaaatgcggagcca
aacgaatctgatatacgcaactggctgaaaggtatcagagacagtgggtacaatgtatta
ggcttgtcaacaaccattggggattcatttttcaaaggtttggatatacattcttttgca
ctagccttagtggagaatatacagtcgatggagttcaggcatataaggcagcttgttcat
tcggttttgattcctttggttaaatattgcccttctgatatgtgggacatctggctggaa
aaacttctgcatccattatttctctactctcagcaggctctcagctgctcatggtccagt
cttctgcatgaaggtagagcaaaggttccagacatccatggaatagttgctgggtcagac
ttaaaagtggaagtaatggaagaaaagctacttcgagatctaactcgtgaaatatgttta
ctcctctcggctatagcttggccaccgctaaataccggtcttccttctttagaacagtct
gggcatattatccgtgtggatatgtcttctcttaaagatttggatgcatttgcatcaagc
tctatggttggttttcttttgatgcgcaaaggtctagcccttcctgccttgcagatatgt
ttagaagctttcacgtggacagatggtgaagccgtgacaaaagtttcttccttttgtgct
gccgtggttgtcctatctgtaacaacgaataacgtggaacttcgagaatttgtttctaga
gatctattttctgcaattatccaagcgttggccctcgagtcaaatgctattaccagtgcg
gatctggttgctctctgtcgtgaaatatttgtttttctctgtgatagagatccagctccc
aggcaggttttgctctcactcccttgcatcaaaccccatgatttggttgcctttgaagaa
gctttgatgaagacatctagtcctaaggaacaaaaacagcatatgaagagcttgctctta
ttagctactggaaacaagttaaaagcactcgctgctcagaaaagtgtaaatgttattaca
aatgtttcattgagggctcgcaatttggtaaatgctccagaaaccaggtctgatgatggg
gatactcttgggctggcagccattttgtga
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