Alnus glutinosa (common alder): 133851285
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Entry
133851285 CDS
T10577
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aglu03019
]
133851285
Messenger RNA biogenesis [BR:
aglu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
133851285
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Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
133851285
NCBI-ProteinID:
XP_062143605
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Position
12:complement(24547757..24555354)
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AA seq
914 aa
AA seq
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MEDSTTCSSLWDQPDDAVSSTQQQRKGSHKRGHPKRQATKLSPSQAAFRFLIHVSATRGL
LGQNGAGVSRIRRETAARIHCEAAAPGSDHRIVLVVGSALKAQREVSSAQEAMLKVFERV
WESAVAENEIEVWWKMVAHKSQIGPVMGRGGKNIKRVSCESGAQVRIFPAPDWMVKDYEL
IQITGVASAVKKALIDVSNCLQDCPPSNKSITSLTRTLGGSSEGSSHVASPDPHADLSPY
FSSPGNSGISALNSNWSIRADDGGDSSQDIKGTQQQEVVFRMLCTNHAAGWVIGKRGAIV
RALQNESGASIMFAAPLTESGERVAIISAWEDLEAACSPAQKAVVLLFARIIEAVADKGF
VSGLSEGRRVMAKLLVASDLVGCLGSNDGEVLSEMREVTGADIWAFEREQTLNCASVNDV
VVKITGEYKSVKNALFQVTGCLRDSQVRAKKPYIRVTEEPLRNDLVPNNIGALSSALRLQ
QITDGFLAVKKEPDGSTCLQDCLSLGKAPTPLRRPLGSSSYGASPEPHAELFSHLSSPLP
PLPGNLGHSASNANTLSTLIRADGVVSGQDRKGTRQEVVFRMLCSGHAAGCVIGKKGTVV
RALQNEAGASISFSSPLTESRDRVVTISAWENLESAYSPAQNAVVLVFCRIIEGVIGKGN
LSGWSEGRPVTAKLLVSSDLVAFLSGNNGKVLSEMREVTGADILILERDQILDCALVNDV
VVQITGEYKSVQNALFQVTGSLRDKFLPSEVFKEARAKSRCVRVNEGPVRNNTVPHNKGA
VSSPPLLQLPQTVGRGQTAGISDHERCLTTFGGDLELGSGNNLATVTNTTVELLISEHVF
GSVYGQDGTNLDRIIEVQKSKCMILVLVKEKGGSLFQGHLIKPLQPRACFKPSSNLQGKH
HIISLISFNHQVID
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggaagattcgactacttgttcatcgctttgggaccaaccggacgacgccgtttcatca
acgcaacaacaacgcaagggctcgcacaagcggggccatcccaaacggcaagcgaccaag
ctctcaccgagccaggcggccttccgattcctcatccacgtgtcggccacccgcggcctc
ctcggccaaaacggcgccggcgtgtcgcgcatccggagagagaccgccgccagaattcac
tgcgaggcggcagcgcccggatccgaccaccggatcgtcctagtcgtcggatccgcgttg
aaagcccagcgcgaggtgtcaagcgctcaggaggcgatgcttaaggttttcgagagggtt
tgggaatcggcggtggcggagaatgagattgaggtatggtggaaaatggtggcgcacaag
tctcagattggcccggtaatggggagaggaggtaagaacatcaaaagagtgagctgcgag
agcggcgctcaggtcaggatcttcccggcgccggattggatggtcaaggactacgagttg
attcagattactggtgttgcttcggctgtaaagaaagcactgattgatgtttctaactgt
ctccaagactgtccaccgtcaaacaaatccataacctcgttaaccagaactcttggaggt
tcttccgagggctcttcccacgtagcctcccctgatccacatgcagatctttctccatat
tttagttcgcctggaaactcagggattagtgctttgaatagcaattggtcaatacgagct
gacgatggaggagattccagccaagacataaagggtacacaacaacaagaagttgtgttc
agaatgctgtgtactaatcatgcagctggttgggtgattggcaaaagaggggccatagtc
agagctctgcagaatgaatctggtgcttctataatgtttgcagctcctttaaccgagtcc
ggcgagcgtgtggccatcatctctgcttgggaggaccttgaagcagcctgctctcctgca
caaaaagccgtagttcttctattcgctagaattattgaggctgtcgctgataagggattt
gtatcaggcttgagtgagggtaggcgtgtaatggctaagcttttagttgcatcagacttg
gttggttgtttgggtagcaatgacggtgaggtactttcagaaatgagagaagtcactggt
gctgacatatgggcatttgaaagggagcagactctgaattgtgcttcagttaatgatgta
gtagtcaagattacaggagagtataaaagtgtaaagaatgctctgtttcaagtcactggt
tgtctgagggatagtcaagtgagagcaaagaagccttatataagagtgactgaggagcct
ctgagaaatgatcttgttcccaacaacataggtgctctctcttcagcattgaggttacag
cagattacagatggctttttggctgtaaagaaagaaccggatggttctacttgtctccaa
gattgtctatcattaggcaaagccccaacccctttaagaagacctcttggaagctcttcc
tatggagcctctcctgagccgcatgcagagcttttctcacatcttagttcgccattacca
cctttgcctggaaatttggggcatagtgcttcaaatgccaatacattgtcgacactgata
cgtgctgatggagtagtttcgggccaagacagaaagggtacacgacaagaagttgtgttc
agaatgctgtgttctggtcatgcggctgggtgtgtgattggcaaaaaagggaccgttgtc
agagcgctgcagaatgaagctggtgcttctatatcattttcatctccattaactgagtcc
cgtgaccgtgttgtcaccatctctgcatgggagaaccttgaatcagcgtactctcctgca
caaaatgctgtagttcttgtgttctgtagaattatcgagggtgtcattggaaagggaaat
ctatcaggctggagtgagggtagacctgttacagccaagcttctagtttcatcagacttg
gttgcttttttgagtggcaataacggtaaggtactttcagaaatgagagaagtcactggt
gctgacatactgatattggaaagagaccagattttagattgtgctctagtgaatgatgta
gtagtacagattacaggagagtataaaagtgtacagaatgctttgtttcaagtcactggt
agtctgagggataaatttttgcccagtgaggtgttcaaagaagcaagagcaaaatcccgc
tgtgtaagagtgaacgagggccctgtgagaaacaacactgttccccacaacaaaggtgct
gtttcttcaccaccgttgttgcagttgccacagactgtgggaagaggacaaaccgcaggg
atttcagatcatgaaaggtgcttgacaacctttggtggtgatttagagctcgggagtgga
aacaaccttgctactgtgacaaatacaacggtcgaacttttgatttctgaacatgttttt
ggctctgtttacggtcaagatgggaccaatttggatcgcataatagaggtgcaaaagtcg
aagtgcatgatcctcgtcctggtgaaagagaagggagggtcgttatttcagggacacctg
ataaaacccttgcagcccagagcttgcttcaagccttcatccaatctgcagggaaaacac
catatcattagtctcatctcatttaatcatcaagtgattgattga
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