Alnus glutinosa (common alder): 133851381
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Entry
133851381 CDS
T10577
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
133851381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aglu04121
]
133851381
Ubiquitin system [BR:
aglu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
133851381
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_At1g61320_AtMIF1
LRR_8
Motif
Other DBs
NCBI-GeneID:
133851381
NCBI-ProteinID:
XP_062143770
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Position
12:complement(4792431..4796298)
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AA seq
585 aa
AA seq
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MQKMAGSSFPEEVLEHVFSFIQDGKDRNVISLVCKSWYEIERWSRRRVFVGNCYAISPRM
VIRRFPEVRSVELKGKPHFADFSLVPDGWGGYVGPWIAAMAAAYPWLEEIRLKRMVVTDE
GLELISKSFKNFKVLVLSSCEGFSTVGLAAIAANCRNLRELDLRESEVEDLSGHWLSHFP
DNYTSLVSLNISCLTSEVSFSALERLVGRCPNLRTLRLNRAVPLDRLANLLRRAPQLVEF
GTGVYASELRPDVFSNLSGAFSGCKELKGLSGFWDAVPVYVPAVYPICSRLTSLNLSYAT
IQSPDLIKLVSQCQNLQRLWVLDYIEDTGLDALAASCKDLRELRVFPSDPYEAEPNVSLS
EQGLVSVSAGCPKLQSVLYFCRQMSNAALRTIARNRPNMTRFRLCIIEPRTPDYVTLQPL
DAGFGAIVEHCKDLQRLSLSGLLTDRVFEYIGTFAKKLEMLSVAFAGESDLGLHHVLSGC
ENLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCCVSFGACKLLGQKMPRLNVEVIDE
RGPPDSRPESCHVEKLYIYRTVAGPRFDMPPFVWTMDEDSELRLS
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatggcggggagctcgttcccggaggaggtgttggagcacgttttctcgttc
atacaggatggcaaggacaggaacgtgatctcgttggtgtgcaagtcgtggtacgagatc
gagcggtggagcaggaggagggtgtttgtgggtaactgctacgcgatcagccctcggatg
gtgatccgacggttcccggaggtgaggagcgtggagctcaaggggaagcctcacttcgcg
gacttcagcctcgtgccagacggctggggaggctacgttggcccctggatcgccgccatg
gccgccgcctacccgtggctggaggagattcggctcaagcgcatggtggtcacggacgag
ggcttggagctcatctccaagtccttcaagaacttcaaggtcctcgtgctttcctcgtgc
gaggggttcagcactgtgggcttagccgccattgctgccaattgcaggaatttgagagag
ctggacctgcgggagagtgaagtggaagacctgagtgggcactggctcagccattttcct
gataactacacgtcattggtgtcccttaacatttcctgcttaacgtctgaggtgagtttc
tctgccctggagcgcctggtgggtaggtgccccaacctgaggactctccggctcaaccgt
gccgtgccccttgacaggcttgcgaaccttcttcgtcgggcacctcagctggttgagttt
ggcacgggggtctatgcatctgagttgcgacctgatgtattctcaaacctatcaggagct
ttttctgggtgcaaggaactgaagggcctgtctggtttttgggacgcagtcccagtctat
gttccagctgtttaccctatctgctctaggctaacatcattgaacttgagttatgccact
atccaaagccctgatcttatcaagctagttagccaatgtcaaaatttgcagcgcttatgg
gtgctggattacattgaagatactggccttgatgcccttgcagcatcttgcaaggatctg
cgagaattgagggtatttccatctgatccatatgaagcagaaccaaatgtatccttgtca
gagcagggccttgtctcagtttctgcaggctgtcccaagctccagtcagttctgtacttc
tgccgtcaaatgtctaatgctgccttaaggaccattgcaaggaatcgacctaacatgaca
aggtttcgtctttgtattattgagccacgaactcctgattacgttactcttcaaccactt
gatgcgggatttggagccattgttgagcactgcaaggatctacagcggctctccctttct
ggtcttctcactgatcgtgtgttcgagtatattgggacttttgccaaaaaattagagatg
ctctctgtagcttttgctggggaaagtgatctaggactccatcacgtactgtctggttgt
gaaaaccttaggaaattggagattagggactgcccctttggtgacaaggctcttttggcc
aatgctgcaaagctggagacaatgcgatccctttggatgtcttcttgctgtgtgagtttc
ggagcttgtaagctgctaggtcagaagatgccaaggcttaatgtcgaggttattgatgaa
aggggacctccagactcgagaccagaaagctgccatgttgagaagctttatatatatagg
accgttgcggggccaaggtttgacatgcctccttttgtttggacaatggatgaagattct
gaattgaggctttcttga
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