Alnus glutinosa (common alder): 133851561
Help
Entry
133851561 CDS
T10577
Name
(RefSeq) multisubstrate pseudouridine synthase 7 isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aglu03016
]
133851561
Enzymes [BR:
aglu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
133851561
Transfer RNA biogenesis [BR:
aglu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
133851561
Prokaryotic type
133851561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H_PUS7L
Motif
Other DBs
NCBI-GeneID:
133851561
NCBI-ProteinID:
XP_062143999
LinkDB
All DBs
Position
12:complement(18712644..18739819)
Genome browser
AA seq
678 aa
AA seq
DB search
MASKTQDESDVGIFCYISKLPGFRGILKQRYSDFIVNEVDMEGKVVHLTSLDAPPEIGEE
TVTMIDDTASNKSYASGIDKFRSLAGDADAKRLEDFISQINSGVEDSMLPIILSPDPDKS
HRTAVHNFFKQNFKFLVTDVVDGPDASSKCIRVRLNNGGHNNKGRNSKKRKERGDKPFDS
RGSENWAENVGKFLRFHLYKENKETQEALGLMGKMLGIQPRSFGFAGTKDKRSISTQRVT
VFKQRAAKLAALNERLIGIKVSDFCYVKEGLLLGQLMGNRFTVTLRGVVADSEDSIKASA
DALGRLGFINYFGLQRFGSGSVPTHLIGATLLRGEWETAVSLILDPREGERDAIAKAREY
YKESNDIEGTLRQLPRHLVAERAVLQCLKKCPGNYLQALKSIPRTLRMMYVHSYQSYLWN
HAASMRVQKCGADQVVLGDLVYCKGDDTETVTGCVNSECEDDKCNDAYDSNNLDEIAGAD
VPEERNNSVKVVTAEDILTGNYTIDDVVLPLPGSRVIYPANDIANVYHDLAKKDVISVTE
SVHTIKEFSITDMTGSYRRVFQRPIDFDWELLTYTDGNIPLVETDLDKIAKSKPVKIVRA
EGPANGNEDSNLLDCTKQSENVENDIKLQSDENEAEGERDAQLALKLSFTLPASCYATMA
IRELLKTSTSVAFHKTLN
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaaaacccaagacgaatctgacgtcggaatcttctgctacatctcaaagctc
cctggctttcgtggcattctcaagcaaaggtattctgattttattgtaaatgaagtagat
atggaaggaaaggttgttcatttgacctccttggatgccccgccagagattggtgaggaa
actgtgacgatgatagatgatacagctagtaataaaagttatgcttctggaattgataag
tttagatccctagctggtgatgctgatgccaagcgtttggaagattttattagtcaaatt
aattctggtgttgaagacagcatgctgccaattattctttccccagatcctgataaatct
caccgaacggcagtgcataatttttttaagcagaacttcaaattccttgtcactgacgtg
gttgatggaccagatgcctcatcaaaatgtattcgtgtgagattaaataatgggggtcat
aacaacaaaggcaggaactccaagaaacggaaagaaagaggtgataagccctttgatagc
agaggttcagaaaattgggcagaaaatgttggcaagttcctcagatttcatctgtacaag
gagaacaaagagacacaggaggccttaggactgatgggaaagatgcttggcatccagcca
aggtcattcgggtttgcgggtacgaaggataagcgctcaatctcaactcaaagggtaact
gttttcaagcagcgtgcggctaaattagctgctcttaatgaaaggctgattggtatcaaa
gtcagtgacttctgctatgtcaaggaaggacttcttcttggccagctcatgggaaacaga
tttacagtcacattgcgaggggttgttgcagattctgaagatagcatcaaagcatctgca
gatgccttggggaggcttgggtttattaactactttggtttacaacgttttggaagtggt
tccgtgccaactcacctgattggagctacattacttcgaggagagtgggagactgctgta
agcttgattcttgatccaagagaaggggaaagagatgcaatagcgaaggcacgggaatat
tacaaggaaagtaatgatatcgaagggactctgaggcagttacctcgacatctggttgct
gaaagggctgtgctgcagtgcttgaagaaatgtcctgggaactacttgcaggctctgaaa
tctatacctaggacattgagaatgatgtatgtacatagttaccaaagctatttgtggaac
catgcagcaagcatgagagtgcaaaaatgtggagctgaccaagttgtgttgggagacttg
gtatattgtaaaggagatgatactgaaacggtgacaggatgtgtcaattctgaatgtgaa
gatgacaaatgcaatgatgcatatgattctaataatctagatgaaattgctggagcagat
gttccagaagaaagaaacaatagtgtgaaggttgtaacagcagaagatatccttactgga
aattatacaattgatgatgttgtactccctttgcctggttcaagggtaatttatccagct
aacgacattgccaatgtctatcatgatttggccaaaaaggacgtaatcagcgtgacggag
agtgtacatactatcaaggaattctcaataactgatatgactggaagttataggcgggtt
tttcaaaggccaattgactttgattgggaattactcacatatactgatggtaatatacca
ttagtagagacggatctggacaaaattgcaaagtctaaacctgtgaagatagtcagagcg
gagggccctgccaatggaaatgaggacagcaatctgttggattgtacaaaacaatcagag
aatgttgaaaatgacataaagcttcaatcagatgaaaatgaagcggagggtgagagagat
gcccagctcgctctcaagttgagctttaccctcccagcttcctgttatgcaacgatggcc
ataagagagcttctcaagacttcaacatctgttgcgtttcacaaaacgttaaactag
DBGET
integrated database retrieval system
