Alnus glutinosa (common alder): 133851604
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Entry
133851604 CDS
T10577
Name
(RefSeq) rhamnogalacturonate lyase B-like isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
133851604
Enzymes [BR:
aglu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
133851604
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
133851604
NCBI-ProteinID:
XP_062144077
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Position
12:24261163..24266101
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AA seq
681 aa
AA seq
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MEKVTWSRQWGSLVGCLGAILLVFFFFADHSGQNTSARRVLWSAKGQKSLEVKLYTDNNQ
LVMLDNGLVQINLSIPDGHVLGINSNGIPDLLDDHNGREDRGYWDVVWNEPGGPSIFERT
VGANFTVLTQNEDQIELSFSKIWDISLRGKSVPLNIDKRYILRRGISGYYSYAVFERLEG
WPEVEIDQIRIVYKLRSDKFRYMALSDERQRIMPTMEDREHGQPLAYPEAVLLTDPSDPK
LRGEVDDKYQYSLENEDNKVHGWISADPPVGFWIITPSNEFRTGGPIKQDLTSHAGPIAL
SMFVSTHYAGKDLGMSFEEGEPWKKVFGPIFVYLNSLSSPPNNPQRLWANAKEQILSEVD
SWPYNFTQSEDFLSSDQRGTVAGQLLVLDRYINEKLMWAQSAYVGLAAPGEVGSWQRESK
GYQFWTQADEKGYFIIKNVLPGEYNLYGWVPGFIGDYKNDTMITIKPGGEVQMDVLVYEP
PRHGPTLWEIGIPDRTAGEFYVPDPYPTLMNRLYNNQPAQKFRQYGLWERYADLYRYQDL
IYTIDVSDYRKDWFFAHVTRRINNGTYGAATWQIVFELESVNNDGNYTLQLALASANEAD
LEVRFNDASAMPSHFSTGLIGRENAIARHGIHGLYWLASVDVASNVLQQGSNTIYLTQSK
SRTPFQGVMYDYLRLEGPPAS
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggtaacctggagtaggcaatggggttcgcttgttgggtgcttaggagcgatt
ttgctggtgttcttcttctttgctgatcattctggtcagaatacctcagctaggagagtt
ctatggagcgccaaaggccaaaaatctcttgaggtgaagctgtataccgacaacaatcag
ctggtgatgttggataatggcctcgtccaaatcaatttgtcaataccggatggtcacgtc
ctggggataaactccaatggtatccctgacctacttgacgatcataatggaagagaagat
agagggtattgggacgtagtttggaatgagccaggaggtccaagtatctttgagagaaca
gtaggagcaaacttcacagttttaacccagaatgaagaccaaatagagctttcttttagt
aagatatgggatatttcgcttcgtggaaaaagtgttcccttaaatatagacaaaaggtac
atattgcggcgggggatttcgggatattattcatacgcagtgtttgagcggcttgaagga
tggccggaggtggagattgatcaaattaggattgtctacaagctccgaagtgacaaattt
cgctacatggcgctatcggatgagaggcagaggatcatgccaacaatggaagaccgtgaa
catggtcagcccctcgcctaccctgaggccgttcttttgaccgatccaagcgaccctaaa
cttagaggagaggtggatgacaagtaccagtactctttagagaacgaggataataaggtt
cacggatggatatccgccgacccacctgttggattctggatcataacacccagcaatgag
ttccgtacaggggggcccatcaagcaagacctcacctcccatgccgggcccattgccctc
tctatgtttgtgagcactcactatgctgggaaggacttagggatgagctttgaagaggga
gagccatggaagaaagtttttggtcccatatttgtgtatcttaactcactttccagtcct
ccaaacaatccccaacgactttgggcaaacgctaaagagcagatattgagcgaagtggat
agctggccatacaatttcacccaatcggaagacttcctttcttctgatcaacgtggaacg
gttgcgggtcaattgctagtccttgaccggtacatcaatgagaaactaatgtgggcgcaa
tctgcttacgtgggcttggcggctcccggagaagtcggttcatggcaaagagaaagcaag
ggttatcaattctggacccaggctgacgagaagggatattttataataaaaaacgtacta
cccggggagtataatttgtatggatgggtccctggttttatcggtgattataagaatgat
accatgattactattaaaccaggtggggaggtccaaatggatgtccttgtgtatgagcct
ccaagacatggtcctactttgtgggaaattgggatcccagaccgcaccgctggagagttc
tatgtacccgacccgtacccgacgctcatgaacagattgtacaacaatcaaccagctcaa
aagttcaggcaatatggattgtgggaacggtatgcagacttgtaccgttatcaggatctc
atatacacaattgatgttagtgattatcggaaggattggttctttgcccatgttaccagg
cgaataaataatgggacgtatggagcagcaacatggcaaatcgtgtttgaacttgaaagt
gtgaacaacgacggaaattacacactccagttggccttggcgtcggccaatgaagctgat
ttggaggttcggttcaacgatgcgagtgccatgccttcacacttttcaacgggacttatt
ggaagagaaaatgccatcgcgaggcacggcattcatggattatattggttggccagcgta
gacgtagcaagtaatgtattgcaacaaggaagcaacacaatatatctaacacaatcgaag
agcagaactcctttccaaggagtcatgtacgactaccttcgtttagaagggcctccggcc
tcctga
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