Alnus glutinosa (common alder): 133851618
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Entry
133851618 CDS
T10577
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aglu03000
]
133851618
03036 Chromosome and associated proteins [BR:
aglu03036
]
133851618
Transcription factors [BR:
aglu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
133851618
Chromosome and associated proteins [BR:
aglu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
133851618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ADD_ATRX
CTD2
Motif
Other DBs
NCBI-GeneID:
133851618
NCBI-ProteinID:
XP_062144095
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All DBs
Position
12:complement(17154847..17243934)
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AA seq
1483 aa
AA seq
DB search
MEEKPEEVEDAESTSGESFIDGSEDEGPSTSGQDEGLHLEEPLSEKEIEELIAEFLEVES
KAAEAQEALEKESLAKLESEVREELTQTLQGEDLETAVADEMATFTEEWEAVLDELETES
AHLLEQLDGAGIELPSLFKWIESEAPNGCCTEAWKKRVHWVGSQMTGEITESIADTEKFL
KIHRPVRRRHGKLLEEGASGFLQKKLAGDGSKGAVTEDPDGSKDAVIEDPVVDWCSLNKI
LSDGIADDDTSFGSKHWASVYLASTPQQAAVMGLQFPGVNEVEEIDDIDGNSNDPFVAAA
IQNEKELDLSEEQKKNFRKVKEEDDAHIDLKLQIHLKQRKHRKRYKQVNQKYVCPVDCVI
ESNVDKSTSDLDNSNPDACQSVKTDVLEGSESSIDLGEKRPISNGDSLLSESALPDYTEP
RGSKRPNESEELKADNKKSRAIIIDSDDETHFVKDNSVCNGANVDSQSDSKEKIRDSGAG
SVPLLSPNEKFDCTACSKIAVEVHQHPLLKVIICWDCKCLMEEKMQVKDPDCSECYCGWC
GGSDDLVSCKSCKTLFCTTCIKRNIGGECLSEIQTSGWKCCCCQPSVLQGLSLQLEKAMG
SGDLMVSSSDSDSDNSDAGVNIAFSSKRRQKKKIRRILDDAELGEETRRKIAIEKERQER
LKSLQDQLKSLQDQFSTKAKTINSAGCMGNLSEGANVEVLGDASTGYIVNVVREKGEEAV
RIPRSISAKLKAHQVAGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLY
TALRSIDLGLRTALIVTPVNVLHNWRKEFMKWRPSELKPLRIFMLEDVSRERRAELFAKW
RAKGGVFLIGYANFRNLSLAKNMKDRHMAREIFNALQDGPDILICDEAHLIKNTKADRTQ
ALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST
LDDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVIAVKLSPVQRKLYKRFLDV
HGFTKDKISISFFAGYQTLAQICNHPGILQLTKEGKDYVDDSSSDENIDYNMVIGEKSKS
TNDYLPGKNGNGLFQEDWWNDLLHESNFKELDYSGKMVLLLDILTMSSDVGDKVLVFSQS
IPTLDLIELYLSRLPRSGKRGKFWKKGKDWYRLDGRTESSDRQKLVERFNEPTNKRVKCT
LISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEE
KIYKRQVTKEGMAARVVDRQQVGRTISKEEEMHLFEFGDEENLDTLTELGKENGRTRNDN
MTGQVENSLKQTMPLSHGSCSSDNIMESLLGKHYPRWISNYHEHETLLQENEEEKLSKEE
QDMAWEVYQRTMEWEEVQRVPVNESACEQRAAVSSMPPPAPDETSSLSESQMRNRMVQRK
CTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDGRVAR
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagccagaggaagtggaagatgctgagagcacttctggtgaatcttttatt
gatggctcagaagacgagggaccatcaacatcgggacaagatgaaggattgcatcttgag
gaacctttgagtgagaaagaaatagaagagctaattgctgagttcttggaagttgagagt
aaggctgcagaggctcaagaagcacttgagaaggaatctcttgccaaactggagagtgaa
gttagagaggagttgacacaaactctccagggggaagatttggaaacagctgttgcagat
gaaatggctacttttacagaagagtgggaagctgtgcttgatgagcttgagactgagagt
gctcatttgctggaacaacttgatggggctggcattgagctaccaagcctttttaagtgg
attgaaagtgaggctcctaatggttgctgcactgaagcttggaaaaagagggtacactgg
gtaggatctcagatgactggtgaaattactgagtcaatagctgatactgagaagtttctt
aaaatccaccggcctgttagaagacgacatggtaaattattggaggagggtgcaagcgga
tttctgcagaaaaaacttgctggtgatggaagcaagggtgctgtaacagaagatcctgat
ggaagcaaggatgctgtaatagaagatcccgtggttgattggtgttctctcaacaaaata
ctttctgatggcatagctgatgatgatacttcgtttggcagtaagcattgggcctctgtt
tacttggccagcactccacagcaagctgcagtgatgggacttcagtttcctggagtcaat
gaggtggaagagattgatgacattgatggcaattctaatgatccatttgttgcggctgct
attcaaaatgaaaaagagctagatctttctgaagaacaaaagaaaaattttagaaaggtt
aaagaagaagatgacgcacatatagatctgaagctgcaaattcatctgaaacagaggaaa
cacaggaagagatataaacaggtcaatcagaaatatgtttgcccagttgattgcgtgata
gaaagcaatgtagacaagtccacctctgaccttgacaattctaatcctgatgcatgccag
agtgtgaagactgatgttcttgaaggttctgaaagttctattgatcttggtgagaaaaga
ccaataagtaatggtgattcattgctttctgagtctgcattgcctgattatactgaaccc
agaggctccaagcgtccaaatgagagtgaggagctaaaagctgataacaagaagagtcgg
gctattatcatagatagtgatgatgaaactcattttgtaaaggataattcagtttgcaat
ggggctaacgtggactctcaatctgattctaaagaaaaaatcagagactccggtgctggt
tctgttcctttgctgagtccaaatgagaagtttgactgtactgcttgtagtaaaatagct
gttgaagtgcaccaacatccacttctgaaagtaatcatttgctgggattgcaaatgctta
atggaagaaaagatgcaggtgaaggatcctgattgctctgagtgttattgtggttggtgt
ggaggaagcgatgacttggtaagttgcaaatcatgcaagacattattctgtaccacttgt
ataaagaggaatatcggtggagaatgcttgtctgagattcagacatcaggctggaaatgt
tgttgctgccaaccaagtgtgctgcaaggattgtcattacagttagagaaagctatggga
tctggagatttgatggtttctagctctgatagtgattctgataattcagatgccggtgta
aatattgcattcagctccaagagaaggcagaaaaagaaaattcggaggatccttgacgat
gctgaattaggagaagagaccagaaggaaaattgcaatcgaaaaggaacgtcaagaacgt
ttgaaatctttacaagatcagttgaaatctttacaagatcagttttctaccaaagctaag
acaattaactctgcaggctgtatggggaatttatctgaaggtgctaatgttgaagtgctt
ggtgacgcttcaactggttatatagtgaatgttgtgagggagaaaggggaagaagctgtc
agaattcctcgaagcatctctgctaaattgaaagcccatcaggttgcagggataagattt
atgtgggaaaatatcatacagtccatcagaaaagtaaagtctggggataaaggtcttggt
tgcattctagctcataccatgggccttggtaaaacttttcaggtcatagctttcttgtat
actgctttgagaagtattgaccttggattaagaactgcactcattgttactcctgtgaac
gtgctgcacaattggcggaaagagttcatgaagtggaggccttcagagttaaagcctctc
cgcattttcatgctggaagatgtatcaagggaaagaagagcagaattgtttgcaaagtgg
agagccaagggtggtgtcttcttgattggctatgcaaattttaggaacttatcccttgcg
aagaatatgaaggatcggcacatggctagagaaatttttaatgccttgcaggatggaccg
gatatacttatttgtgatgaagcccatttgattaagaatactaaggctgataggacccaa
gccttgaaacaagtgaaatgccagagaaggattgcattaaccggatcacctcttcaaaac
aacctcatggaatattattgtatggttgattttgtaagagagggttttctcggaagcagc
catgagtttaggaaccgcttccaaaatcccatagaaaacggtcagcatactaattcaact
cttgatgacgttaaaattatgaaccaaaggtctcatatcctttatgaacagttaaaagga
tttgtccagagaatggacatgaatgtggtgaagaaggatttgccacctaaaactgtcttt
gtaatagctgtaaagctttctcccgtacaaaggaaactatacaagagattccttgatgtg
catggattcactaaggacaagatctccataagtttttttgctgggtaccagaccttagct
cagatatgcaaccatcctgggatcttgcaattgacaaaagaaggcaaagactatgtggat
gacagctctagtgatgaaaacatagattataatatggttattggagagaagtcaaagagc
acaaatgattatctgccaggaaagaatggtaatggcctttttcaagaggattggtggaat
gatcttcttcatgaaagcaattttaaagagcttgattacagtggcaagatggttttgctg
cttgacatcctaaccatgtcttctgatgtgggggataaggtattggtttttagccagagc
ataccgaccctagatctaatagaactttatctttcaagattacctcgaagtggcaaaaga
gggaagttttggaagaaaggaaaagactggtataggctagatggaagaaccgagagctct
gataggcaaaagctggttgagaggtttaatgagcccacaaataagagggtgaagtgcact
ctgatttcaacaagagctggatctttggggattaatcttcatgctgctaatcgtgtagtt
atagttgatggttcttggaatccgacatatgatctacaggctatatatcgagcttggagg
tatggccaaacaaagcctgtgtttgcttaccgactgatggcccatggaactatggaagaa
aagatatataagcgtcaggtgacaaaggagggcatggctgcaagggtggtagatagacaa
caggtaggtaggactatttctaaagaagaggagatgcatctctttgaatttggtgatgaa
gagaacctggacactttgaccgagctgggtaaagagaatggacgtacaaggaacgataat
atgactggccaagttgaaaattctcttaagcagacaatgccactttctcatggaagctgc
tcttccgacaatataatggaaagtttacttggaaagcattatcctagatggatttccaac
taccatgaacatgagacccttttgcaagagaatgaggaagaaaagctatcaaaagaagag
caagacatggcttgggaagtataccagagaacaatggaatgggaggaagtgcagcgagtt
cctgtaaatgaatctgcatgcgagcaaagagcggcagtgtcaagcatgccccctcctgca
cctgatgagaccagcagcctctcagaatcccagatgaggaatcgtatggtacagcggaaa
tgcactaacctttcacacttgctgacccttagaagccagggcaccaaagtgggttgcagt
acagtttgtggggaatgtgcccaggagataagctgggaggaccttaaccgggatggcaga
gtagcaaggtga
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